Lactobacillus helveticus DPC 4571: lhv_1340
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Entry
lhv_1340 CDS
T00625
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lhe
Lactobacillus helveticus DPC 4571
Brite
KEGG Orthology (KO) [BR:
lhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhe03016
]
lhv_1340
Enzymes [BR:
lhe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
lhv_1340
Transfer RNA biogenesis [BR:
lhe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
lhv_1340
Prokaryotic type
lhv_1340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ABX27342
UniProt:
A8YVQ5
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All DBs
Position
complement(1324662..1325555)
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AA seq
297 aa
AA seq
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MLNGILVIDKDKGMTSADVVYHLRKALYIRKIGHAGTLDPEVTGVLPIAIGQATKLIELM
HTRPKEYIGSGLFGYATDSYDSTGTVLKKTKLTQAFTSDDIQSHMNEFLGEIEQVPPIYS
AVKVNGKHLYEYAREGIAVERPKRKVDILQYDLTDKPVFNETEGQEKFDFRIKCSKGTYV
RSLVNDLGEKMNCPAVMTYLRRVASSGFDISQAVKLSEIEANPEKAVELIQPIDAFFKDY
PQIDLSEEKWLKVKNGAGISLEIDAKKVALRYNKKVKAIYEKKGKLYRPSLMLLQNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggaattttagttattgataaagacaaagggatgactagtgctgatgtagta
tatcatttgcgaaaagctttgtatattcgaaaaattggacacgctggtacacttgatccc
gaagtaaccggagtattgcctatcgcaatcggacaagcaactaagttaattgaacttatg
catactagacctaaagaatatattggtagtggtttatttgggtatgctacagatagttat
gattcaacaggtacagttttaaaaaagactaagctaactcaagcttttacttccgatgat
attcaaagtcatatgaatgaatttttaggtgaaatcgaacaagtaccgccaatttattca
gcagtaaaagtaaacggcaagcatttatatgaatatgctcgagaaggaattgcagtagaa
cgacctaaacgcaaagttgatattttgcaatatgatttgacagataaacccgtatttaat
gaaacagaaggacaagagaaatttgattttcgaattaagtgtagcaaaggtacttatgtc
agatcattagtaaatgatttaggcgaaaaaatgaactgtcccgcagtgatgacttattta
agaagagtagctagttcaggttttgatatttctcaagcagttaaattaagtgaaattgag
gccaatcccgaaaaagcggtagaattgattcagccaattgatgctttctttaaagactat
cctcaaattgacttaagtgaggaaaaatggcttaaagtaaaaaacggtgcaggtatttcg
ttagaaatagatgctaaaaaggttgcattaaggtacaataaaaaagtcaaggcgatttat
gaaaagaaaggtaaattatatcgcccaagtttaatgttgcttcaaaatgagtaa
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