Lactobacillus helveticus DPC 4571: lhv_1380
Help
Entry
lhv_1380 CDS
T00625
Name
(GenBank) Double stranded RNA-specific ribonuclease RNase
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lhe
Lactobacillus helveticus DPC 4571
Brite
KEGG Orthology (KO) [BR:
lhe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
lhv_1380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhe03019
]
lhv_1380
03009 Ribosome biogenesis [BR:
lhe03009
]
lhv_1380
03036 Chromosome and associated proteins [BR:
lhe03036
]
lhv_1380
Enzymes [BR:
lhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
lhv_1380
Messenger RNA biogenesis [BR:
lhe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
lhv_1380
Ribosome biogenesis [BR:
lhe03009
]
Eukaryotic type
90S particles
RNase
lhv_1380
Prokaryotic type
rRNA processing factors
lhv_1380
Chromosome and associated proteins [BR:
lhe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
lhv_1380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ABX27377
UniProt:
A8YVU3
LinkDB
All DBs
Position
complement(1368173..1368859)
Genome browser
AA seq
228 aa
AA seq
DB search
MVSTKFLKKLKDEYSIEFNNEKLLEEAFTHSSYSNEHPNDGIRDYEKLEFLGDAVLELAV
SDYLYRHYPKLNEGELTRLRSNIVRTEGFSEFAIECGFQNEIHLGNGEEKAGARKRKTLL
EDVFEAFNGALFLDQGMPAVQHFLHLTVYPLIDKGEFDDSRDYKTDLQELLQQNGPVNIE
YSVISESQLPPHFVVELKINDQVQTQGEGHNKKAAEQQAAKAALQKLE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtacaaaatttttaaaaaaattaaaagacgaatatagtattgaatttaataat
gaaaaactattagaagaagcatttacacattcttcatattcgaatgaacatcctaatgat
gggattcgtgattatgaaaaattggaattcttaggtgatgctgttcttgaattagctgtt
tctgattatttgtaccgtcattatcctaaattgaatgaaggcgaattaacccgattaaga
tctaacattgttagaactgaagggttctctgaatttgcgattgaatgtggttttcaaaat
gaaattcacttaggaaatggtgaagaaaaagctggtgcacgtaagcgtaaaactttattg
gaagatgtttttgaagcatttaatggtgcattattcctagatcaagggatgccagcggtc
caacatttcttacatttaaccgtttatccattaattgataagggtgaatttgatgactca
cgtgattataagactgatttgcaggaattgttgcaacaaaacggacctgtcaatattgaa
tattcagtcattagcgaatcacaattgccaccacactttgtggttgagctaaagatcaat
gatcaagttcaaacacaaggtgaaggtcataataagaaagctgcagaacaacaagccgct
aaagcagctttacaaaaattagagtaa
DBGET
integrated database retrieval system
