Lactobacillus helveticus DPC 4571: lhv_1406
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Entry
lhv_1406 CDS
T00625
Name
(GenBank) Primosomal replication factor
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lhe
Lactobacillus helveticus DPC 4571
Pathway
lhe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
lhv_1406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhe03400
]
lhv_1406
Enzymes [BR:
lhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lhv_1406
DNA repair and recombination proteins [BR:
lhe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
lhv_1406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
ResIII
DEAD
Helicase_C
Zn_ribbon_PriA
AAA_19
PIF1
AAA_30
Zn_ribbon_6
AbiEi_4
IBR_1
nSTAND_NTPase5
HypA
Trm112p
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABX27393
UniProt:
A8YVW3
LinkDB
All DBs
Position
complement(1391244..1393643)
Genome browser
AA seq
799 aa
AA seq
DB search
MIAQVIVDVAAKQTDRIFEYHIPAELEKDVKIGSRVIVPFGRRKVQGFVVGIEEKSQFKG
KLKDLLVTVDEMPPLTPELIKLSENLAQNIFSYRITILQAMLPWVMRAGYRKLLVPANEK
AKQIPFFQGDPVDLSKMTDLKQIKKAHQLLKSDDAKIEYVVENRAKEKKENQYELTLDSA
EYTKIYNTLRQNAVKQKQLIMDIIENKDDYPKSQSSLIKGLGLSTASLNSAVEKGWLKRK
AVEVYRNPLAGFEDEEKPVPVTLNDEQQTALNQINKAIDQHKAETFLLEGITGSGKTEVY
LHAIGQALAQGRNALMLVPEISLTPQMVKQVKARFGDKVAVLHSALSEGEKYDEWRRIRR
GEIQVVVGARSAVFVPLDNIGLIVIDEEHESSYKQESNPRYNAKNVAIWRSKYHHCPLVL
GSATPSLGSRARAQKDVYHLLRLTKRANHKKLPKVNLIDLKHVQFAGGQFDLSVELVDAI
KKRLEKKEQVILMLNRRGFANFMLCRECGFVLKCPNCDVSLNLHKDTNSMQCHYCGHTEP
IPTRCPNCQSSKIRFVGTGTQKVQEELDELLPGARILRMDVDTTRRKGSYKRILDSFGNH
EADILLGTQMIAKGLDFPNVTLVGVINADTGLWLSDYNASEKTFELLTQVAGRAGRADKE
GEVLIQTYNPEHYAIQLAQTQDYERFYGYEMHMRHAGNYPPYFYTVLISVAAKKEQNAAR
EAFKIKRYLLQHLNNQVIILGPSPSAISRVKNQYYYQILVKYKKEPNLNKLLHHVQDSAQ
EAKKYGLSIFIDNEPERIM
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgattgctcaggttattgttgatgttgcagctaagcaaacggatcgtattttcgaatat
cacattccggctgaattagaaaaagatgtaaaaatcggttcaagggtaatagtgccattt
ggtcggagaaaagtacaaggctttgtggttggtatagaagaaaaaagtcaatttaaaggc
aaactgaaggatttactagtcacagtagatgaaatgccaccacttacgccggaattaatc
aaattatctgaaaatttagcacaaaatattttttcatatagaataactattttgcaggct
atgctgccatgggtaatgcgagcaggttatcgcaaactattagtgcctgcaaatgaaaaa
gcaaagcagatacccttttttcaaggtgatccagttgatttatccaaaatgacggatctg
aagcaaataaaaaaggctcatcaattgttaaaaagtgatgatgccaaaatagaatatgtt
gttgaaaatagggctaaagagaaaaaagaaaaccaatatgaattgacgcttgattctgcg
gaatatactaaaatttataatactttgcgccaaaatgcagttaagcaaaagcaattgatt
atggatatcattgaaaacaaggatgattatcctaaaagtcaaagtagtttaataaaggga
ttgggtttgtctacagctagtttgaattctgccgttgaaaaagggtggttaaaaagaaag
gctgttgaagtttatcgtaatcctttagctggctttgaagatgaagaaaagccggttccg
gtaactttaaacgatgaacagcaaactgcattaaatcaaattaataaagctatagatcag
cataaagcagaaacttttttgcttgagggaattactggcagcggaaaaactgaagtatat
ttacatgcaattgggcaagctttagctcaaggaagaaatgctttgatgctagtgccagaa
atttcgttgactcctcaaatggttaaacaagtgaaagcacgttttggtgataaggtggct
gttttgcacagtgctttatctgaaggtgaaaaatatgatgaatggcgcagaattcgccgc
ggcgaaattcaagtagtagttggagcaagaagtgcagtttttgtaccgctggataatatt
ggcttaatcgtaattgatgaggaacatgaatcatcatataagcaagagagcaatccgcgc
tacaatgctaaaaatgtggcaatttggcgcagcaagtatcatcattgcccactagtacta
gggagtgccactccatcgcttggaagtcgtgctcgcgctcaaaaagatgtctatcattta
ttgcggttaaccaaacgcgcaaatcacaagaaattaccgaaagttaatttgattgatctt
aaacatgttcaatttgcgggtggtcaatttgatctatccgttgaattggttgacgccatt
aagaaaagactagagaaaaaagagcaggttatcttaatgcttaaccggcgtggctttgct
aattttatgctctgtcgggaatgtggttttgttttgaaatgtcctaattgtgatgtctcg
cttaacttgcataaagatactaatagcatgcaatgtcactattgtgggcatacagagcca
atacctactcgttgtcctaattgtcagagttcaaagattcgtttcgtaggaacgggaacc
caaaaagttcaagaagaacttgacgaacttttgccaggagctagaattttaagaatggat
gttgataccaccagaagaaaaggtagttataaacgcatcctagattcatttggtaatcat
gaagcggatattttgctaggaactcaaatgattgctaaaggattggactttccaaatgta
actttagttggcgtaattaacgcggatacgggattatggttatctgattataatgcatcg
gaaaaaacttttgaattattaacgcaagttgcaggccgtgcgggccgagccgacaaggaa
ggcgaagttctaattcaaacttataatccagagcactatgccattcaattggcacaaacg
caggattatgaaagattttatggttatgaaatgcatatgcgtcatgctggtaattaccca
ccatatttttatacagtattaatatcagttgctgctaaaaaagagcaaaatgcggctaga
gaagcatttaagattaaacgatatttattgcagcatttgaataatcaagtgataatctta
ggaccatctccaagtgcaatttctagagtaaaaaatcaatattattaccaaatactggta
aaatataaaaaagagccaaatttgaataaactgttacaccatgttcaagattctgctcaa
gaagctaaaaaatatggattaagtatttttatcgataatgaaccagaaagaataatgtaa
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