Leptotrichia hofstadii: JCM16775_0318
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Entry
JCM16775_0318 CDS
T06149
Name
(GenBank) RNA binding S1 domain-containing protein
KO
K06959
protein Tex
Organism
lhf
Leptotrichia hofstadii
Brite
KEGG Orthology (KO) [BR:
lhf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
JCM16775_0318
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Paralog
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GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
Tex_central_region
HHH_3
S1
HHH_9
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
DUF4874
Motif
Other DBs
NCBI-ProteinID:
BBM37633
UniProt:
A0A510JII5
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Position
343214..345379
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AA seq
721 aa
AA seq
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MDIVASVAKELNFKVPQVENTIKLFDEGATVPFIARYRKEVTGNLDEEQIRDVIEKITYY
RNLEKRKEEVIRLIEEQGKLTEELHKSIVNAMKLQEVEDLYLPYKKKKKTKADIAKDQGL
EPLSEFALAKGTTMEQLEKEAKKYVTEEVADVKAAIEGVHLIIAQDISENIKIREFLRDK
IAKFGILTSKVIEKNKENDEKGVYQDYYEYSEQIGRSASNRILALNRGEKEKILRVDIDI
DEKTEEVITNFILNTFENKNLTEFFKEIIKDSLDRLAYPSIKNEVRNIYTEKAEEEAINI
FSENLEKLLLQPPLSKKTLMGLDPGYRTGCKMVIINKDGFYETNDVLFLVDGVHNERQLA
AAKKKILDYIAKYDVDIIAIGNGTASRETEAFVADVIKDSKKKVSYLIANEAGASIYSAS
KLAIEEFPDLDVTARGAISIARRIQDPMAELVKIDPKSIGVGMYQHDVNQKKLNETLEQT
IEHVVNNVGVNINTASWALLSFVSGIKKNVAKNLVDYRHENGDFKDRKQLKKVKGLGDKA
FEQMAGFVVVPDSENPLDNTIIHPESYHIAEIILKEAGCKVEDLKNDLDAVRQKLQKIDL
EKIIKENDFGRETAKDVYEALLKDRRDPRDEFEKPLLRSDILNMDDLTEGMVLEGTVRNV
AKFGAFVDIGLKNDALIHISEIAEKFVSDATKELSVGQIIKVKILSLDKERGRVGLTRKG
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
ttggatattgtagctagtgtggcaaaggaactaaattttaaagtgccacaagtggaaaat
acgataaaactttttgatgaaggtgcgactgtaccgtttattgctaggtatcggaaggaa
gttacaggaaatctggatgaggagcagattagggatgtaattgagaaaattacgtattac
agaaatttggaaaagaggaaagaggaagttataaggctgattgaggagcagggaaaatta
actgaggaattgcataaaagtattgtaaatgcgatgaaactgcaggaagtggaagatctg
tacctgccttataagaaaaagaaaaaaacaaaggcggatattgcaaaagatcaagggttg
gagcctctttcagaatttgcactggcaaaaggaactacgatggagcagctggaaaaagaa
gccaagaagtatgttacggaagaagtggcggatgttaaggctgcaattgaaggagttcac
ttgattatcgctcaggatatttcggaaaatattaaaatcagggagttcttaagggataaa
attgcaaaatttgggattttaacttctaaagttattgagaaaaataaggaaaatgatgaa
aaaggtgtttatcaggattattatgaatattcggagcagattggtagaagtgcttcaaat
aggattcttgcgttaaatcgtggagaaaaggaaaaaatattgagagtcgacattgatatt
gacgaaaaaacagaagaagttataacaaactttattctgaatacttttgaaaataaaaat
ttgactgaattttttaaggaaattataaaagattcactggacagactggcttatccatcc
ataaagaatgaagtgagaaatatttatacagaaaaagcggaagaagaagcaatcaacatt
ttttctgaaaatctggaaaaactattgttacaaccgcctttatcgaaaaaaacacttatg
ggattggatccaggatatagaacaggctgcaagatggtaattattaataaagatggattt
tacgaaacaaatgacgtactttttcttgtagatggagtacataacgaaagacagcttgct
gctgcaaagaaaaaaatattggactatatagcaaaatatgacgtggatattattgcaatt
ggaaatggaacagcttcgagggaaacagaggcttttgttgccgatgtaataaaggattct
aagaaaaaagtttcatatctgattgcaaatgaggctggggcttcgatttactctgcttcc
aaacttgctattgaggaatttcctgatctggatgttacggcaagaggagcaatttccatt
gcgagaaggattcaggatccgatggcagaacttgtaaaaattgatccaaaatcaattgga
gtgggaatgtatcagcatgatgtaaatcagaaaaaattaaatgaaactttggaacagaca
attgagcatgtagtaaataacgtaggagtcaatataaatacagcttcatgggcattatta
agttttgtttctggaattaagaaaaatgtggcaaaaaatcttgtggactatagacacgaa
aatggtgattttaaggacagaaaacagcttaaaaaagtaaaaggtctgggagataaggca
tttgagcagatggcaggatttgttgttgtgcctgacagtgaaaatccgcttgataacacg
attatccatccagaatcatatcacattgcagaaattatcttgaaggaagctggctgtaaa
gttgaggatttgaagaacgatttggatgctgtaagacaaaaattgcagaaaatagacttg
gaaaaaattattaaggaaaatgattttggaagggaaacagcgaaggatgtgtacgaggca
ctgctaaaagacagacgtgatccccgtgatgaatttgaaaaaccgcttttacgttcggat
attttgaacatggatgatttgacagaaggaatggttctggaagggactgtaagaaatgtg
gcaaaatttggggcatttgttgatatagggctaaaaaatgatgctttgattcatatttct
gaaatagcagaaaaatttgtttcggacgctacaaaggaactttctgtgggacaaattata
aaagttaaaatattgtcactagataaggaaagaggaagagttggacttacaagaaagggg
ctttaa
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