Leptotrichia hofstadii: JCM16775_1093
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Entry
JCM16775_1093 CDS
T06149
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lhf
Leptotrichia hofstadii
Pathway
lhf03420
Nucleotide excision repair
lhf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JCM16775_1093
03430 Mismatch repair
JCM16775_1093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhf03400
]
JCM16775_1093
Enzymes [BR:
lhf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCM16775_1093
DNA repair and recombination proteins [BR:
lhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JCM16775_1093
MMR (mismatch excision repair)
Other MMR factors
JCM16775_1093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
DUF1599
Motif
Other DBs
NCBI-ProteinID:
BBM38384
UniProt:
A0A510JGI3
LinkDB
All DBs
Position
1115815..1118025
Genome browser
AA seq
736 aa
AA seq
DB search
MSSILDELNEEQRKAAEKIEGPVLILAGAGSGKTRTVTYRIAHMVKEIGISPLNILALTF
TNKAAREMKERAAALIGHEANNLVVSTFHSFSVRLLKTYSERIGYGRNFNIYDVDDQKSI
ITKIKKDMGIKDNDNVQPGKLANRISKLKEQGIGIKELEREIDMRIPANRLFGEIYQKYD
EVLKANNAMDFSDLLLNARKLLDDAFVLERIQERYQYIVVDEYQDTNDIQYEMINMIAAK
YRNICVVGDEDQSIYAFRGANINNILNFERDYKEAFTVKLERNYRSTKKILDTANELIKN
NKSSKGKTLWTDGSDGEKIKIYNAMTVYDEADFIVTEMKKKKRDGADYKDMTILYRTNAQ
SRVLEEKLLSANIPYKIYGGMQFFQRKEIKDILAYLSLLNNKNDNHNFYRIINVPKRSVG
EKTLEKIQEVANEKNISMLEALHYIDEIPVRAATKLALKEFYNLMQGIYSSLEEMSIKEI
FDEILIKTRYIDSIEDNKEDRVRNIEELLNSITEIEKQNPSMSLNEYLDMISLSSATDQM
EDDENYVKLMTIHSSKGLEFDYVFLAGMEDGLFPSISFDAPEEELEEERRLCYVAITRAK
KELFISYSSSRKIWGKDDNLRRPSRFIYEMKQDNLEYVGGKYGSLKGQSSSPRSFTPKIE
NFNPFSKDKLWTFSKKSGNSQDSSNVNSKYKVGDVVNHKKFGRGKIKKVDTKSMIVEFMV
GEKKIALVLADKILEK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtattttagatgaattaaatgaagagcagagaaaagctgcagaaaaaatagaa
gggcctgtattgatactggctggagcgggaagcggtaaaacacggacagttacttataga
attgcacacatggtaaaagagatagggatttcgccgcttaatattctggcacttactttt
acgaataaggcggcaagagagatgaaggaaagggctgcggcacttattggacatgaggcg
aataatcttgtagtttctacatttcactcgttttcggtaagactgcttaaaacttattct
gaaagaattggatatgggcgaaattttaatatttatgatgtggatgatcagaagtcaatt
attacaaagataaaaaaggatatgggaattaaggataatgacaatgttcagccaggaaaa
cttgcaaacagaatcagtaaattgaaggaacaggggataggaattaaggagcttgaacgt
gaaattgatatgaggattcctgcaaacaggcttttcggcgagatttatcagaagtatgat
gaagttttgaaggcaaataatgcgatggatttttcagatttgcttttgaatgcaagaaaa
ttgctggatgatgcttttgttctcgaaagaattcaggaaaggtatcagtatattgtggtg
gacgagtatcaggataccaatgatattcagtatgaaatgattaatatgattgcagcaaag
tatcgaaacatctgtgtcgtaggggatgaggatcagagtatttacgcatttcgtggagca
aatattaataacattctgaattttgagagagattacaaggaagcatttacggtaaaactg
gaaagaaattaccgttctacaaagaaaatactggatacagccaatgagcttattaaaaat
aataaaagttcaaaagggaaaacactttggacagatggctcagatggagaaaaaatcaag
atttataatgcaatgactgtttatgatgaagcagatttcattgtgacagagatgaaaaaa
aagaaaagagatggtgccgattacaaggatatgacgattttgtacaggacaaatgcacag
tcaagagttttggaggaaaaactgctgtctgcaaatattccatataaaatttatggcgga
atgcagttctttcaacgtaaggaaataaaggatattttagcatacttgagtcttttaaat
aataaaaatgataatcacaatttttatcgtataattaacgttccaaaacgttcggtgggg
gaaaagactcttgaaaaaatacaggaagttgcaaatgaaaaaaatatttcgatgcttgaa
gcacttcattacattgatgaaattccagtaagagcagctacaaaactagcattaaaggaa
ttttacaatttaatgcaaggcatttactcaagccttgaagaaatgtcaattaaggaaata
tttgatgaaattcttataaaaacacgttatattgactcaattgaagacaataaggaagac
agggttagaaatattgaggaattgttaaacagtattactgaaattgaaaagcaaaatcca
agcatgtccttgaatgagtatcttgatatgatttcgttaagttcagcaactgatcaaatg
gaagatgatgaaaattatgtaaaacttatgacaattcacagttcaaaagggctggaattt
gattatgtctttcttgcgggaatggaagatgggctatttccgtcaatttcttttgacgct
cctgaagaagagctggaagaagagcgtagactttgctatgttgcgataacccgtgctaaa
aaagaactgtttatttcctattcttcatcaagaaaaatttggggaaaagatgataattta
cgtcgtccatcaagatttatctacgaaatgaagcaagataatctagagtatgtgggcgga
aaatacggaagcctaaaagggcaatcttcatctccaagaagttttacaccgaaaatagaa
aattttaatccattttctaaagataaattatggacatttagcaaaaaatcaggtaattct
caagattcttcaaatgtaaattcaaaatataaagttggggatgttgttaatcacaagaaa
tttggacgtggaaaaataaaaaaagtggatacaaaaagcatgattgtggaatttatggtt
ggagaaaagaaaatagcattggttttggcggataaaattttggaaaaataa
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