Leptotrichia hofstadii: JCM16775_1503
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Entry
JCM16775_1503 CDS
T06149
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lhf
Leptotrichia hofstadii
Brite
KEGG Orthology (KO) [BR:
lhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhf03032
]
JCM16775_1503
03400 DNA repair and recombination proteins [BR:
lhf03400
]
JCM16775_1503
Enzymes [BR:
lhf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JCM16775_1503
DNA replication proteins [BR:
lhf03032
]
Prokaryotic type
DNA Topoisomerases
JCM16775_1503
DNA repair and recombination proteins [BR:
lhf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JCM16775_1503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Sec3_CC
Motif
Other DBs
NCBI-ProteinID:
BBM38793
UniProt:
A0A510JLZ9
LinkDB
All DBs
Position
complement(1535428..1537767)
Genome browser
AA seq
779 aa
AA seq
DB search
MARKLVIVESPSKAKTIEKILGRNYEVVASYGHVIDLPKTKFGIDVENNFEPQYKVIKGK
GEVLKKLKEKAKSANAVYLASDQDREGEAIAWHISNYIKQPDKVKRIEFNEITKTAVNNA
IKNPRDINDNLVNAQQARRLLDRIVGYKISPLLWKIINRNASAGRVQSVALKLICDLEDE
INAFVPQKYWEVSALIEKDINLNLVKIADEKVDKIFDEKVIKKLKKDLKNEALTLEKIEV
KKKSQRPPLVFKTSTLQQLASSYLGYGASKTMNIAQQLYEGLAINGENKGLITYMRTDST
RISVDALNMAKDYITKNYGEKYVGKYIVKNSKSNVQDAHEGIRPSDINLVPDNIKAYLNN
DQYRLYKLIWDRFLVSQFAAMQYEQMQINAVNGDYNFRGTINKVIFDGYYKIFKDEDEIK
TGDFPELKEGNVHPIDKLNVEEGITKPPTRFSEATLVKKLESEGIGRPSTYASIVETLKS
REYVELIEKRFYPTYLGYEVKDELVKNFKDIMNVKFTANMEKELDKVEEGTVEWVQLLRT
FYDSLEKDIDKFEKEIDKIKNRRIVSDVLDSEGNPMVLKTGLYGKYLISETNEKEKISLK
GIAISPEVLKKGEIFVKEEVEKLQNNKKGILTDYFDEAGNRYVLKVGRFGEYLESENYEK
DEKRMSLPAELKQKYKKGAVIELDGVLQISEEMKRLQEIDRKIIEEAGTCEFCGKPYEIK
TGRFGKFLACTGYPECKTIKNIKTGKVTRVTEKSEKAKKTTKKATKAKSATTKKKNKTK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
ttggctagaaagttagttattgttgagtcaccgtcgaaggcaaaaactattgaaaaaata
cttggtagaaactacgaagttgttgcatcttacggacatgtgattgatttacctaaaaca
aagtttgggatagatgtggaaaataattttgagcctcaatataaggttataaaaggaaaa
ggtgaggttttaaagaaattaaaggaaaaagcgaaaagtgcaaacgctgtttacctggca
tcagatcaggatagggaaggggaagcgattgcttggcacatttctaattatattaagcag
cctgacaaggtaaaaaggatagaatttaacgagataacaaagacggctgtaaataatgcg
attaaaaacccaagagatattaatgataaccttgtaaatgcacagcaggcaagaagacta
ttggatagaattgtgggatataagataagtccgcttttatggaaaataattaatcgtaac
gccagtgctggtcgtgtacagtcagttgcattaaagctgatttgtgacctggaagatgag
ataaatgcgtttgtaccccaaaaatattgggaagtaagtgcattaattgaaaaagatatt
aatcttaatttagtaaaaattgcagatgaaaaagtggataaaatctttgatgaaaaagtt
ataaaaaaattgaaaaaagatctgaaaaatgaagcattgacgcttgaaaaaatagaagtt
aagaaaaaatcgcaaagaccaccacttgtatttaagacaagtacactgcagcagcttgct
tcatcatatcttggttacggtgcaagcaaaacaatgaatattgcacagcagctttatgaa
ggacttgcaattaatggggaaaataaaggactaataacatatatgagaacagattccaca
agaatttctgttgatgccctaaatatggcaaaagattatattacaaaaaattatggtgaa
aaatacgttggaaaatatattgtaaaaaattcaaaatcaaatgttcaggatgcccacgaa
ggaatccgtccatctgatattaacttagttccagacaatataaaagcttatttgaataat
gatcagtacagattgtataaattgatttgggatagatttctagtttcacagtttgcagct
atgcagtacgagcagatgcaaattaacgctgtaaatggggattacaattttcgtgggact
attaataaagtaatttttgatggatattacaagatttttaaagacgaggatgaaattaag
actggtgattttccagaattaaaggaaggcaatgttcatccaatagacaaattgaatgtg
gaagaaggaataacaaagcctccaacaagattttctgaagcgacgcttgtaaaaaaactg
gaatcagagggaattggccgtccatcgacttatgcttcaattgttgaaacgcttaaatct
agggaatatgttgaacttattgaaaagcgtttttatccaacatatttgggatacgaggta
aaggatgaacttgttaagaactttaaggacattatgaatgtaaaatttacggcgaatatg
gaaaaggaactggataaggttgaagaagggacagttgaatgggtacagcttttgagaact
ttttatgattcgcttgaaaaggatattgataagtttgagaaggaaattgataaaataaag
aatcgcagaattgtgtcggatgtgctggattcagagggtaatccgatggttttaaaaaca
gggctttatgggaaatatttaatcagcgaaacaaacgagaaggaaaaaatttcgttaaaa
ggaattgcaatatcgccagaagttcttaaaaagggagaaatctttgtaaaagaggaagta
gagaaacttcaaaacaataaaaaaggaattttgaccgattattttgatgaagctggaaac
agatatgtgcttaaagttggacgatttggggaatatcttgaaagtgaaaattatgaaaaa
gatgaaaaaagaatgtcgttgccagctgaattgaagcaaaaatataaaaaaggagctgta
atagagctggatggagtattgcaaataagcgaggaaatgaaacggttgcaggaaattgac
agaaaaataatagaagaagcaggaacatgtgaattttgcggaaaaccgtatgaaataaaa
actggaagatttggaaaatttttggcttgtacaggctacccagaatgtaagactataaaa
aatataaaaactgggaaagttacaagagtgactgaaaaatcggaaaaagccaagaaaact
acaaaaaaagcgactaaagcaaaatctgcgacgaccaaaaagaaaaataaaaccaaataa
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