Leptotrichia hofstadii: JCM16775_1855
Help
Entry
JCM16775_1855 CDS
T06149
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lhf
Leptotrichia hofstadii
Brite
KEGG Orthology (KO) [BR:
lhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhf03016
]
JCM16775_1855
Enzymes [BR:
lhf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JCM16775_1855
Transfer RNA biogenesis [BR:
lhf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JCM16775_1855
Prokaryotic type
JCM16775_1855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BBM39144
UniProt:
A0A510JIM2
LinkDB
All DBs
Position
complement(1887328..1888404)
Genome browser
AA seq
358 aa
AA seq
DB search
MEKNFTKDGLILLNKSKGVSSFGAINHLKKVIKAKKVGHAGTLDPMAEGLMIVMINEATK
FSDNLMKKDKEYYVEMELGYKTDTYDLEGTVIAKYDSEINISDSEIIQAVNSFKGKIKQV
PPMYSAIKIEGQKLYDLARKGIEVERAERNVEISEIREIKVMHPDKNSEYAQNIKISFYA
KVSSGTYIRSLVYDIGEKLGVFATMTRLVRTKIGRFEIEDAITLEKAKAEIDKLKNLIES
KRENESFWATKSDSDTRAEKIREIVCFVEIEYVLDYYGINVSNVKYGKLKNGMTVIDTFK
KFENISKEASKGANVRENQKFKIYVRNKNTNAREFKGIVKIVNIRGDRIYLKRDKYFL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaattttactaaggatggacttattcttttaaataaaagcaagggagtaagt
tcgtttggggcaataaatcatttgaaaaaagtgataaaggctaaaaaagtaggacatgct
ggaacccttgatccaatggctgagggacttatgattgttatgattaatgaagctacaaaa
ttttctgataatttaatgaaaaaagacaaggaatattatgtagaaatggagcttggatac
aaaacagacacttacgacctggaagggacagttattgcaaaatatgattctgaaattaat
ataagtgattctgaaataatacaggctgtaaatagtttcaaaggcaagataaagcaagtc
ccgccgatgtattccgcaataaagattgaagggcagaagctttatgatctggcaagaaaa
gggatcgaagtggaaagagccgaaaggaatgtagaaatatcagaaattagagaaataaag
gtaatgcatccagataaaaattcagaatatgctcaaaatattaaaatttcattttatgca
aaagtcagcagtggaacctatatccgttcattagtttacgatattggagaaaaattagga
gtttttgccacaatgacaagacttgtgaggactaaaattggaagatttgagattgaagat
gcgattactttggaaaaggctaaagctgaaattgataaattgaagaatcttatagaatcc
aaaagagaaaatgagtctttctgggctacaaaaagtgattcagatacaagggctgaaaaa
attcgggaaatagtttgttttgtggaaatagagtatgtgctggactattacggaataaat
gtttcaaatgtgaagtatggaaagctgaaaaatgggatgacagtaattgatacgtttaaa
aaatttgaaaatataagcaaggaagccagtaaaggggcaaatgtaagagaaaatcagaaa
tttaagatatatgtgagaaataaaaacacaaatgcaagagaatttaaggggattgtgaag
attgtaaatattaggggagataggatttatttgaaaagagataagtactttttgtaa
DBGET
integrated database retrieval system
