Leptotrichia hofstadii: JCM16775_2237
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Entry
JCM16775_2237 CDS
T06149
Name
(GenBank) long-chain-fatty-acid CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lhf
Leptotrichia hofstadii
Pathway
lhf00061
Fatty acid biosynthesis
lhf00071
Fatty acid degradation
lhf01100
Metabolic pathways
lhf01212
Fatty acid metabolism
lhf02024
Quorum sensing
lhf04146
Peroxisome
Module
lhf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lhf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JCM16775_2237
00071 Fatty acid degradation
JCM16775_2237
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JCM16775_2237
09145 Cellular community - prokaryotes
02024 Quorum sensing
JCM16775_2237
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lhf01004
]
JCM16775_2237
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lhf04147
]
JCM16775_2237
Enzymes [BR:
lhf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JCM16775_2237
Lipid biosynthesis proteins [BR:
lhf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JCM16775_2237
Exosome [BR:
lhf04147
]
Exosomal proteins
Exosomal proteins of breast milk
JCM16775_2237
Exosomal proteins of breast cancer cells
JCM16775_2237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
PP-binding
AMP-binding_C_3
SWIRM-assoc_2
DpnD_N
WSLR
Motif
Other DBs
NCBI-ProteinID:
BBM39512
UniProt:
A0A510JJM6
LinkDB
All DBs
Position
complement(2305578..2308058)
Genome browser
AA seq
826 aa
AA seq
DB search
MFLERTERLALVDFDNKHINYIDLIDNIKYFSEYVVELEKEKFGLIVMENRPEWIYSFFA
VWDKKSAGIALDANSNSGEILYVLEDSHPNVIFCSNETEKTVFEAVEKYSSKNTVKIINV
DKITVEQEKMNAIKNMQFELENPSGDETAAMLYTSGTTGSPKGVMLSFNNLNTEMEGLYE
KGIFDYRDQILAILPFHHVLPLTASVLLMLKYQTSIVFVQKIASKEIFDALEKNRVTAII
GVPRVFKLFYDGIKQQIDAKFITRFIYKMMSNVKSLKIKRKVFAKVHKKFGGHLDFIVVG
GAKMDPEISKFYETLGFYALEGYGLTETAPVIAVNSKKERKIGTVGKKLNNIEIKIVDEE
LWVKGPIVMKGYYNKPDKTAEVITEDGWFKTGDLAAIDEEGYVTIRGRKNTMIVLSNGKN
IDPETLENRVIAQSNGLIKEIGIFNYKNKLAAIIVPDLLEFRKRGITNTKAYIKNIVEDY
NLKAHNYEKVLDYKLFEEELPKTRVGKTRRFMLPDLYEKNEVVKKEKTPEPTDEAYKILK
EYVKKNKGIEPHPEENLELEIGMDSLDIVEFFAFIENSFGIQLDEEKFAGMSNLKLLSEY
INQKATKFEDNDIDWKQIISETKPIEDNKNRWVTKFLKIFQPIVDLYFRVKKIDRKKLTD
NPQIFVSNHQSFADPLILGSLFPNKIVFNTLFLAIDWYFKKGVMKLLVSNGNVVLIDINK
NIRKSVEEIVGYLKGGKSIVIFPEGARTKDGKVAQFKKVFAIIAKELNVDVQCLGIKGAF
EAYSRYMKFPKPKKIEVAVLEKFSPEGSYDEITQKAEKIIREYVEN
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtttttagagagaacagagcggctggcattagttgattttgacaataagcacattaat
tatattgatttgatagataatataaaatatttttctgagtatgtagttgaattggaaaag
gagaagtttggactgattgttatggaaaatcgtccagaatggatttacagcttttttgca
gtatgggataaaaaatcagctgggatcgcccttgatgcaaacagcaattcaggcgaaatt
ttatacgtgctggaagattcacatccaaacgtaattttctgctcaaatgaaacagaaaaa
actgtttttgaagcagttgaaaaatatagttcaaaaaatactgtaaaaataataaatgtg
gataaaattacagttgaacaggaaaaaatgaatgctataaaaaatatgcagtttgaactt
gaaaatccatctggagatgaaacagcggctatgctttatacttcaggtacaactggaagc
ccaaaaggtgtaatgctgtctttcaataatttaaatactgaaatggaaggactttacgaa
aaagggatatttgattacagggatcagattttggcaatattgccatttcaccatgttctg
cctttgacggcaagcgttcttttgatgttaaaatatcagacttcaattgtatttgtacaa
aaaattgcaagcaaggaaatatttgacgcgcttgaaaaaaatagagtaactgcaataata
ggagtgccaagagtattcaagctattttatgatggaataaagcagcaaattgacgcaaaa
ttcattacacgatttatttacaaaatgatgagcaatgtcaaatcattgaagataaaaaga
aaagtctttgcaaaagttcataaaaaatttggtgggcatcttgactttatcgttgtcggt
ggagcaaaaatggatcctgaaatttcaaagttttatgaaacattaggattttacgccctt
gaaggttatgggcttaccgaaactgcaccagttatcgccgtaaattcaaaaaaagaaaga
aaaatcggaacagttgggaaaaaacttaataacatcgaaataaagattgtggatgaagaa
ctgtgggtaaaaggtccgattgttatgaaaggttattacaataagcctgataagacggcg
gaagtaattactgaagacggatggttcaagacaggagacttggcggcaattgatgaagaa
ggctatgttacaattcgtggaagaaaaaatacaatgattgtcctttcaaatggtaaaaat
attgaccctgaaacgcttgaaaatagggtaattgcacaaagtaacggattaatcaaggaa
attggtatttttaattacaaaaataagttagctgcaataatcgttccagatctgttagag
tttagaaaacgtggaattacaaatacaaaggcttatataaaaaatatagtggaagattac
aacctaaaggcgcataactatgaaaaagtgcttgattataagctgtttgaggaagaattg
ccaaaaactagagttggaaagacacgtagatttatgctgccggacttatacgaaaaaaat
gaggttgtaaaaaaggagaaaacacctgaaccaaccgatgaagcatataaaatattaaag
gaatatgtcaagaaaaataaaggaattgagccacatccagaagaaaatctggaacttgaa
atcggaatggattcacttgatattgtggaattttttgcgtttatagaaaacagttttgga
attcagctggatgaagaaaagtttgctggaatgtcaaatttaaaattattatctgaatac
atcaaccaaaaagctacaaaatttgaagacaacgatattgactggaaacagattatcagc
gaaacaaaacctatagaggacaataaaaaccgttgggtaacaaaatttttaaaaatattt
cagccaattgtcgatttatatttcagagtaaaaaaaattgacaggaaaaaattaacagac
aatccgcaaatttttgtatcaaatcatcaaagttttgcagatccattaattctaggatca
ctatttccaaataaaattgtttttaatacattatttttagcaattgactggtattttaaa
aaaggtgtaatgaaacttcttgtttcaaatggaaatgttgttctgattgatattaacaaa
aatatcagaaaaagtgtagaagaaatagttggatatttaaaaggtggaaaaagtattgta
attttcccagaaggagcaaggacaaaagatggaaaagttgcccaatttaaaaaggtattt
gccataattgcaaaggaactgaatgtagatgtccaatgtcttggaataaaaggtgcattt
gaagcatattcaagatacatgaagttcccaaaaccgaaaaaaatcgaagtggcagtgctg
gaaaaattctcgccagaaggaagctatgatgaaattacacaaaaagcagaaaaaattata
agagagtatgttgagaactaa
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