Leptotrichia hongkongensis: JMUB5056_0321
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Entry
JMUB5056_0321 CDS
T06709
Name
(GenBank) RpoD subfamily RNA polymerase sigma-70 subunit
KO
K03086
RNA polymerase primary sigma factor
Organism
lhg
Leptotrichia hongkongensis
Pathway
lhg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lhg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JMUB5056_0321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhg03021
]
JMUB5056_0321
Transcription machinery [BR:
lhg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JMUB5056_0321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
RPA_C
Motif
Other DBs
NCBI-ProteinID:
BBM58740
UniProt:
A0A510L432
LinkDB
All DBs
Position
320538..321716
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AA seq
392 aa
AA seq
DB search
MSDKKQNLKNSLANFIKQAREQKVVSYEEINSVLSIGFSTEKIEQLIKKLTDDGVQIVDT
IKEKEDLLKVPDSIEAIEKMEISDFEDSHDEFVESEIDDSEVDKLLQTDLLKMAESMDVD
EPIKMYLREIGQIPLLSYEEEIEYAQRVLNGEEEAKQKLIESNLRLVVSIAKKHTNRGLK
MLDLIQEGNMGLMKAVEKFEYEKGFKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETI
NKIKKESRIILQETGKEPTAEELAEKLELPVEKVKSILEMNQDPISLETPVGSEEDSELG
DFVEDDKFANPYDATTRVLLKEQLDEVLKTLNEREEMVLRYRYGLDDGSQKTLEEVGKIF
NVTRERIRQIEVKALRKLRHPSRRKKLEDYRS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaaaaacaaaatttaaaaaatagtctcgcaaattttataaaacaggcacga
gagcaaaaagttgtaagttacgaagaaataaattctgttttatctatcggattttcaact
gaaaaaatcgagcagttaataaaaaaactgactgatgacggtgttcaaatcgtagatact
ataaaggaaaaagaggatttattaaaagttcctgattccatagaagctatcgaaaaaatg
gaaatatcggattttgaagattcgcatgatgaatttgtagagagtgaaatcgacgattcg
gaagtggataaactattacagacagatttgttaaaaatggcagaaagtatggatgtagat
gaaccaataaaaatgtatttacgtgaaattggacaaattccactacttagctatgaagaa
gaaatcgaatatgctcaacgagttttaaatggcgaggaggaagcaaaacagaaattaata
gagtcaaatttaaggcttgttgtcagtatcgcaaaaaaacatacaaatcgtggcttgaaa
atgctggatttaattcaggaaggaaatatggggcttatgaaggctgtggaaaaatttgaa
tatgaaaaaggattcaagttttcgacttatgcaacttggtggattagacaggctataaca
cgtgcaattgcagatcagggaagaacaataagaatacctgttcatatgattgaaacaatt
aataaaatcaaaaaggaaagccgtattattttacaggaaactggaaaagagccaacagca
gaggaattggctgaaaagttagaattaccagtagaaaaggtaaaaagtattttggaaatg
aatcaggatccgatttcacttgaaactccagttggaagtgaagaagatagtgaactggga
gatttcgtggaagatgataaatttgcgaatccttatgacgcaacaacgagagttctatta
aaggaacagcttgatgaagtattaaaaacattaaatgagcgtgaggaaatggtgcttaga
tatagatatggactagatgacggttctcagaaaactcttgaagaggtggggaaaatcttt
aatgtaacaagggaacgtattagacagattgaggtaaaagcattaagaaaattaagacat
ccaagcagaagaaaaaaattggaagattacaggagctaa
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