Leptotrichia hongkongensis: JMUB5056_0383
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Entry
JMUB5056_0383 CDS
T06709
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lhg
Leptotrichia hongkongensis
Pathway
lhg03410
Base excision repair
lhg03430
Mismatch repair
lhg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JMUB5056_0383
03430 Mismatch repair
JMUB5056_0383
03440 Homologous recombination
JMUB5056_0383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhg03400
]
JMUB5056_0383
DNA repair and recombination proteins [BR:
lhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JMUB5056_0383
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JMUB5056_0383
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JMUB5056_0383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BBM58801
UniProt:
A0A510L6X6
LinkDB
All DBs
Position
382414..385404
Genome browser
AA seq
996 aa
AA seq
DB search
MRNTKWAAKIIPNPRQEREYIERDDKQKNDEKTKKMKKSKTEKQNFENTNLSSVIDNDIL
KILYSRGITTEKKIREFLNPKLENIQNPYGLQDMEKTVLEIEKAIKEQKNIWIYGDYDVD
GITSTSILYMALKELGAENVNYYIPIRDEGYGLNNEALKKIKESGADLVITVDCGITAFP
EVEFANSINLPIIITDHHNLHGDKVPDAITVVNPKRPENEFSFEFLAGVGTIFMVILCLY
ERIGKKAKAYKYLDLVAIGTVADIVPLVEENRILTKFGLEQLSRSKNKGLRFLLYKLFST
QNSGFNEKTEYNSYDVGFIIAPVFNAAGRLKDAKMVVKLLISDNDREIEIIVKELINKNF
ERKELQNQIVEKVEKHIEESDLKEDYVIVDYSPEYHHGVIGIAASKIVDKYYKPAIIIEV
KEDEGIAVGSCRSIGNFNILEALQSMPELFVKFGGHSGAAGFTIGIKNLELFRKKINKFA
KTKLKEEDFVKIIEIDKQIPIQKVSYEFFQIIELLKPFGFGNPMPTFRTNNVLFENIKFI
GENKNHIMFDIKQKGFFNKNAVWFNSGEYFKELNENLFYDIVYKLKTEMFQDRYYTKVYV
EDVKVSQLKDDTLSYYHSLFNTSFPMKSVFYTNIELETEKKITMKMEFDQVSLFQGRKFI
GRLDYSISNLLILLNQYYNWNFTVKMEDVKQASNHNIVNILIKRDYNFKCYDYTQIGIFK
KIKEFLIGKMEYNSQTKELLAQFFKQNKNLIIKNIFDENEKYKYKMSNFENFLLTVGIYY
KKMTDKKSQIVISSDKKPIFNNFIKSYFDINEEYSENDYPFTLFYNYKDTEKLENIIKTD
FSMQNEINYEIKENSQNLEVNEEPKQLEYKKIEKIEFKNNENVENSENIVEKPQENTEKL
SEAGKQEVENRFCIIINSEDFMVKTDDLDKNNIEEIDTKIEVPENIMFLENSTKKERKNA
KNIFVEYLPIEEKMKLKKLLTDGEKIYSDYSVNEIL
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatacgaaatgggctgcaaaaattattcctaatccacgacaggagagggaatat
attgaaagagatgacaagcagaaaaatgatgaaaaaacaaaaaaaatgaaaaaaagtaag
actgaaaaacagaattttgaaaatacaaatttaagttcggtaattgataatgatattttg
aaaatactttattcacggggaataacgacagagaagaaaatcagggagtttttgaatcca
aaacttgaaaatatccagaatccttatggactgcaggatatggaaaagacagttttggaa
attgaaaaggcgataaaggaacagaaaaatatttggatatacggggattatgatgtggat
ggaattacttcgacatctattttgtatatggcgttaaaggagcttggggcggaaaatgtg
aactactacattcctattcgggatgaagggtatgggttgaataatgaagcattgaaaaaa
ataaaagaatctggggcagatttggtaattactgtggattgtggaattacagcgtttcct
gaagtggagtttgcaaattctataaatttgccgataattattacagatcaccataattta
catggggataaagttccagacgctattacagttgtgaatccaaaacgtcctgaaaatgaa
ttttcctttgaatttctagcgggagttgggactatttttatggtaattctttgtctttat
gaaagaattgggaaaaaggcaaaagcatataaatatctagatttagtagcaattggtaca
gttgcggatattgtgccactggttgaagaaaacaggattttgacaaaatttgggctggag
cagcttagccgttctaaaaataaggggcttagatttttgctgtataaattgtttagtacg
caaaattcaggttttaatgaaaaaactgagtataattcgtatgatgtgggctttatcatc
gcacctgtctttaatgcggctggaaggcttaaagatgcaaaaatggtggtaaaattgcta
atttctgataatgacagggaaattgagataatcgtaaaggaattgattaataagaatttt
gagcgaaaagaattgcagaatcaaatcgtcgaaaaagtggaaaaacatattgaagaaagc
gatttgaaggaagattatgtgattgtagactattcgcctgaatatcatcacggagtaatt
ggtatagcggcttccaaaattgtggataaatattacaagcctgcgattatcattgaagtg
aaggaagatgaaggaatagcagttggatcatgccgaagcattggaaattttaatatttta
gaggcgttgcagtcaatgcctgaactttttgtaaagtttgggggacattctggagcagca
ggatttacgattggaataaaaaatttggaattatttaggaaaaaaataaataaatttgca
aaaacaaaactgaaagaagaggattttgtaaaaataatagaaattgataagcaaatacca
attcaaaaggtttcctacgaatttttccaaataatagaacttttgaagccatttggcttt
ggaaatccaatgccgacattcaggacaaataacgtactttttgaaaatataaaatttatt
ggagaaaataaaaatcatataatgtttgacataaagcaaaagggattttttaataaaaat
gctgtctggtttaattctggcgagtattttaaagagttgaatgagaatttgttttacgat
attgtttataaattaaagacagaaatgtttcaggacagatattatacgaaagtgtacgtt
gaggatgtgaaggtatcgcaattgaaggacgatactttgtcttattatcattcgcttttt
aacacatctttcccgatgaagtcggtattttatacaaatattgagctggaaacggaaaag
aaaattacaatgaaaatggaatttgaccaggtttcgctttttcaaggaagaaagttcatt
ggacggcttgattacagcatttccaacttgttaatacttttaaatcagtattataactgg
aattttactgtgaaaatggaggatgtgaagcaggcttcaaatcataatattgtaaatata
ttgataaaaagagattataattttaaatgttatgattacacgcaaattggtatttttaag
aaaataaaagaatttttgattgggaaaatggagtataattcacagactaaagaattgctg
gcacagttttttaagcaaaataaaaacttgattataaaaaatatttttgacgaaaatgaa
aaatataaatacaaaatgtcaaattttgaaaactttttactgacagttggaatttattat
aaaaaaatgactgataaaaaaagtcaaattgtaataagttcagataaaaagccaattttt
aacaattttataaaatcatattttgatataaatgaagaatattctgaaaatgactatcca
tttacattgttttataattacaaggatacagaaaagctagaaaatattataaaaacagat
ttttcaatgcaaaacgaaatcaattatgaaattaaggaaaatagccaaaatcttgaagtt
aatgaagagccaaaacagctggaatacaagaaaattgaaaaaatagagtttaaaaataat
gaaaatgtggaaaactctgagaatattgtggaaaaacctcaggaaaatactgaaaagtta
agtgaagctggaaaacaggaagtagagaacagattttgcataataataaattctgaagat
tttatggtaaaaacagatgatttggacaaaaataatattgaagagatagatacgaaaatt
gaagtgccagaaaatataatgtttttagaaaattcaacgaagaaggagagaaaaaatgca
aaaaatatttttgtagaatatttaccgattgaagaaaaaatgaaattgaaaaagttactt
actgatggagaaaagatttattctgattattcggttaatgagattttgtaa
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