Leptotrichia hongkongensis: JMUB5056_1635
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Entry
JMUB5056_1635 CDS
T06709
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lhg
Leptotrichia hongkongensis
Pathway
lhg03030
DNA replication
lhg03430
Mismatch repair
lhg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JMUB5056_1635
03430 Mismatch repair
JMUB5056_1635
03440 Homologous recombination
JMUB5056_1635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhg03032
]
JMUB5056_1635
03400 DNA repair and recombination proteins [BR:
lhg03400
]
JMUB5056_1635
Enzymes [BR:
lhg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JMUB5056_1635
DNA replication proteins [BR:
lhg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JMUB5056_1635
DNA repair and recombination proteins [BR:
lhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JMUB5056_1635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BBM60041
UniProt:
A0A510LAF2
LinkDB
All DBs
Position
complement(1661941..1665498)
Genome browser
AA seq
1185 aa
AA seq
DB search
MGNKFVHLKLHTEYSLLEGVGKIDEYVEKAKEIGIKALAITDTSMFGAIEFFKKCKNAGI
KPIIGLEVFLDGLEKVGEFSLTLLAKNQNGYKNLSKLSSISYSRFTRNRNKIKYDELKKY
SDDLYILSGGINSEVIKGILDLENTQVRRVIEKLGKDFGDNFFIEVPAVERLEKARKMLF
DIVRKNKFDNFVITNDVYYPNREDTVLQKIVESIKAGSKIDAEKSDSSEILYDDLHLKSE
NEIEKSFENKEYSEFYETGINNVEKIVENCNVDFEFHHFKFPKYSLPQNISEKEFLRNLV
FKGLFHKYLKKSVSDSEKLQLDKNFEIIEKEIAKDEIAGQKLKEVKIREELLKNNLENVL
ERAEYELEIIDKMGYNGYFIIVWDFIKFSRENGVYVGPGRGSAAGSIVSYALNITEIDPL
EYNLIFERFLNPERISMPDIDIDFDQEQREIVINYVVNKYGAEYVAHIITFGTLKARLAI
RDVGRVLNVSLVKVDKIAKMIPFNTELKDALNNIPEIRKMYETDREIKRVIDYSLKLEGK
VRHASVHAAGVVISKDVLSDEIPTYSDGKTKIVSTQYQMKELEELGILKMDFLGLKNLTI
LRKTVENIEKRRKIKIDLNDISLNDEKTYELLTKADTMGVFQCESAGIRSLMKKMKIEKF
EDIIALLALYRPGPLRSGMVDDFINVKNNRTEIKYIDDSLKYILEETYGIILYQEQVMKI
VSEMANYSLGEADELRRAIGKKNPELMKKNREKFVTNAQKNGVLSKKANEIYDLVEKFGG
YGFNKSHSAAYALIVYWTAYFKANYPLEFFAAIMTTEVHNLDRFVVFVNEAKEKGINIFL
PDVNLSDYDFEIEENQEDKENFGKVGIRFGLFAIKGVGAALISEIKKERKNGKFVSYKDF
GYRMKQNGITKKQLESLILSGALDGLDGNRFEKYKSIDKVLEYSQKKYESEEDLQMILFG
GKKEMSVDFQMEKNDEFPQKVLLQNEKEYLGIYVSSHPLNEKKNLINIIFHNKISEISQK
ELKKVRIIGIVKNVKKFATRAGKEPMVKFEMEDFQKSIEVVCFPREYVTFGYKITEGQIM
VLEGIVNSEQNKNTLILNNICNIENLEENKNLKLYILIDEEVKEKNQELKQIVLKNKGDN
QVFLAFKTNEKKEVVKLSEKYNVNLSLKFIRKVAKLVGIERIKLK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataaatttgtacatttgaaattgcatacggagtattcactgcttgaaggagta
ggaaaaatagatgaatatgttgaaaaggctaaggaaattggaataaaagcacttgcaatt
accgatacttcgatgtttggggcaattgagttttttaaaaagtgcaaaaatgctggaata
aagccgattattggacttgaggtttttcttgacgggctggagaaagtgggggagttttcg
cttactttacttgctaaaaatcagaatgggtataaaaatttatcaaaattgtcatcaatt
tcatatagcaggtttacacggaataggaataaaattaagtatgatgaattgaaaaaatat
tcagatgacttgtatattttgtcaggtggcataaatagtgaggttataaagggtattctg
gatttggaaaatactcaggttagaagggttattgagaaacttggtaaggattttggggat
aatttttttattgaagttcctgctgtggaaaggctggaaaaggctaggaaaatgcttttt
gacattgtgcgtaaaaataaatttgataattttgttattacgaatgatgtttattatccg
aatagagaagatacggttttgcagaagattgtagagtcgataaaagcgggaagtaaaatt
gatgccgaaaaatcagacagtagtgaaattttgtatgatgatctacatctaaaatctgaa
aatgaaatagaaaaaagttttgaaaataaggaatatagcgagttttatgaaactggaatt
aataatgtggaaaaaattgtggaaaactgcaatgttgattttgagtttcatcattttaaa
tttccgaaatattcattgccgcaaaatataagtgaaaaggagtttttacgaaatctagta
tttaagggactttttcacaaatatttaaaaaaatctgtttcagattctgaaaaattgcag
ctggataaaaattttgagataattgaaaaagagattgcaaaagatgaaattgctggacag
aaattgaaagaagttaaaattcgggaagaattattaaagaataatttggaaaatgttttg
gagcgtgcagagtatgagctggaaattattgataaaatgggatacaacggatattttatc
attgtatgggattttataaaattttcacgtgaaaatggagtttatgttggacctggaagg
ggttctgcggctgggagtattgtttcgtatgccttgaatattacggaaattgatccgctt
gagtataatctgatttttgagcgttttttgaaccctgaacgtatttcgatgcctgatatt
gacatagattttgatcaggaacagcgggaaattgtcataaattatgtggtaaataaatac
ggagcggaatacgtggcacatattattacgtttggaacgctaaaggcaaggcttgcgatt
cgtgatgtggggcgtgtgttaaatgtttcgcttgtaaaagtcgataaaatcgctaaaatg
ataccatttaatactgaactgaaagatgccttgaacaatattcctgaaattagaaaaatg
tacgaaaccgacagagaaataaaaagagtgattgattattcactaaaattggaggggaaa
gttcgtcatgcctctgttcatgcagctggagtcgttatttccaaagatgtgctaagcgat
gagattccgacttattctgatggaaaaacgaagattgtttcgacacagtatcagatgaag
gaactggaagagctgggaattttaaaaatggatttccttggattgaaaaatctcacaatt
ttgcggaaaactgtggaaaatattgagaaaagaagaaaaataaaaatagatttaaatgat
atttcgctaaatgatgaaaaaacttatgaactacttacaaaggctgatacaatgggagtt
ttccaatgtgagtcggctggaatcagaagccttatgaaaaaaatgaaaattgaaaaattt
gaggacataatcgcattgcttgcactgtatcgtccaggacctttgcgaagtggaatggtg
gatgattttataaatgtgaaaaataacaggacagaaataaaatatattgatgattccctg
aaatacatacttgaggaaacttacggaataattttgtatcaggagcaggttatgaaaatc
gtgagtgaaatggcaaattattcacttggggaagctgatgagctacggcgtgcgattgga
aagaaaaatcctgaactaatgaagaaaaatcgtgaaaaatttgtaacgaatgctcaaaaa
aacggagttttatcgaaaaaagcaaacgaaatttatgatttagtggaaaaatttggtgga
tatggatttaacaagtcacattcggcggcttacgccttgattgtttactggacagcatat
tttaaagcaaattatccgttagaattttttgctgcgataatgacaaccgaagtgcataat
ctggatagatttgttgtttttgtgaatgaagctaaggaaaaaggaattaatatatttttg
ccagatgtgaatttgtctgattatgattttgaaattgaagaaaatcaggaggataaagaa
aattttggaaaggttggaataagatttggactttttgcgataaaaggcgtgggagcagca
ttaattagtgaaataaaaaaagaacgaaaaaacggaaagtttgtttcctacaaagatttt
ggatatcggatgaagcaaaatggaattacaaaaaaacagctggaatcattaattttatcc
ggagcattggatggacttgatggaaacagatttgaaaaatacaagtctattgacaaagtt
ctagaatacagccagaaaaaatacgaatctgaagaagatttgcaaatgattttattcggc
ggtaaaaaagaaatgtcagttgacttccagatggaaaaaaatgatgaatttcctcaaaaa
gtattgcttcaaaatgaaaaggaatatttgggaatctatgtttcaagccatcctttaaat
gagaaaaaaaatctgataaatataattttccataataaaatatcagaaatttctcaaaaa
gagctaaaaaaagtacgaattattggaatagtaaaaaatgtgaaaaaatttgcaacacgg
gctggaaaagagccaatggtaaaatttgaaatggaagattttcaaaaaagtattgaagtt
gtctgttttccaagagaatatgtaacttttggctataaaataacggaagggcagattatg
gtgctggaaggaattgtaaattccgagcaaaataaaaatacacttattttaaacaacatt
tgcaatattgaaaatctggaagaaaataaaaatctaaaattatacattttaattgacgaa
gaagtgaaagaaaaaaatcaggaattgaagcagattgttttaaaaaataaaggcgataat
caagtatttttagcgtttaaaacgaatgagaaaaaggaagttgtaaaactgtctgaaaaa
tataatgtgaacttgtcactcaagtttattaggaaagttgcgaaattggtgggtattgag
agaataaagttgaaatga
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