Lactobacillus helveticus H9: LBH_0006
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Entry
LBH_0006 CDS
T03040
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lhh
Lactobacillus helveticus H9
Brite
KEGG Orthology (KO) [BR:
lhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhh03032
]
LBH_0006
03400 DNA repair and recombination proteins [BR:
lhh03400
]
LBH_0006
Enzymes [BR:
lhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LBH_0006
DNA replication proteins [BR:
lhh03032
]
Prokaryotic type
DNA Topoisomerases
LBH_0006
DNA repair and recombination proteins [BR:
lhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBH_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
MutL_C
Motif
Other DBs
NCBI-ProteinID:
AHI11043
LinkDB
All DBs
Position
6459..8888
Genome browser
AA seq
809 aa
AA seq
DB search
MMRSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELGVTPDKPYKKSARIVGEVMG
KFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDEPAAMRYTEARMSKIAVEML
RDINKNTIDWQRNYDDTENEPVVLPARIPNLLINGANGIAVGMTTNIPPHNLSEVISGLH
MLMKNPDATTKDLMKVIPGPDFPTGGIIMGRGGIYRAYESGKGNIVVRAETNIETEKSGR
ERIIVSEIPYMVNKAELVKKIADLAREKIIDGITGVRDESDQTGMRITIDIRRDASASVV
LNNLFKQTQMQANFGMNMVAIVDGAPHYLTLKQMLQYYLDHQKDVVTRRTKFELAKTEAR
AHILEGLRIALDNIDEIVHIIRSSHSSDIAKATLISRFGLDDKQSQAILDMRLVRLTGLE
RDKVEAEYKELQAKIADYKDILSKPERIDKIIYDELLDIQKRFGDKRRTEIGASEVVSIE
DEDLIEKQNILLTVTHNGYIKRMPIQEFKTQNRGGKGIKGMGVQDGDFIEHLIYSSTHDM
LLFFTNAGKVYSKKAYEIPEYGRMAKGLPVVNLLQLEKGEKVQTVINVPEGADDNYLFFI
TKMGTVKRTHVSEFSNIRNSGLIALTLRDGDELSNVLTTDGKQNILIGTHLGYAVTFNEN
DVRAMGRTAAGVRGINLRDHDYVVGSGVLDADDQVLVISENGYGKRTPAAEYPVKGRGGK
GIKTANITEKNGPLAGVIVISKGKDIMVITTDGIMIRFKTKDVSQTGRSTMGVRLIKVSD
DSQVASLTIVPSEADQDQVDDEDDNDDNE
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtagttctttcttggactatgcaatgtcagttattgtagctcgtgctttgcct
gatgttcgtgatggtttgaagcctgtacagcgccgtattctttacggaatgagcgaatta
ggtgttacacctgataagccatataagaagagtgccagaattgttggggaagttatgggg
aagtttcacccacacggtgactcatcaatttatttagctatggctcacatggcacaagac
ttttcatatcgttacatgctagttgacggtcacggtaactttggttccgtcgacggggat
gaaccagccgcaatgcgttataccgaagcaagaatgagtaaaatcgctgtggaaatgctt
cgtgatatcaacaaaaatacaatcgactggcaaagaaactatgatgatactgaaaatgaa
ccagtagttttgccagctagaattcctaacttgttgattaacggtgctaatggtatcgct
gttggtatgacaaccaacattccacctcataacttaagtgaagtaattagcggtttgcat
atgttgatgaaaaatcctgatgcgactactaaggatttgatgaaagttattccaggtcct
gattttccaactggtggtattatcatgggtcgcggtggaatttaccgtgcttatgaaagt
ggcaagggcaatatcgttgttcgtgctgaaaccaacattgaaactgaaaagagtggccgt
gaaagaattatcgttagcgaaattccttacatggtcaacaaggctgaattagttaaaaag
attgcagatttagctcgtgaaaagatcattgatggtattaccggtgttcgcgatgaatct
gaccagactggtatgagaattaccatagatattcgtcgggatgctagtgcgagtgttgtt
ttgaataatttattcaagcaaactcaaatgcaggccaacttcggcatgaacatggttgcc
attgttgacggtgcacctcactacttaactttgaagcaaatgttgcaatactatttggat
caccaaaaagatgttgtaacgcgtagaactaagttcgaattagccaagactgaagctaga
gctcatattcttgaaggtttaagaatcgctctagataatatcgatgaaattgttcatatt
atccgtagcagtcattcaagtgatattgctaaagcaactttaattagtcgttttggtctt
gatgataagcaatctcaagcaattttggatatgcgtcttgtacgtttaaccggtttggaa
cgagacaaggttgaagccgaatataaagaattgcaagctaagattgctgactacaaggat
attttgtctaagcctgaacgaatcgataagatcatttacgatgaattattagatattcaa
aaacgttttggtgataagcgtagaactgaaatcggtgctagtgaagttgtttcaattgaa
gacgaagatttaattgaaaagcaaaatattcttttgactgtaactcataatggctatatc
aagagaatgccaattcaagaatttaagacccagaaccgtggtggtaaaggtatcaagggt
atgggcgttcaagatggagacttcattgaacacctaatttactcaagtactcacgacatg
cttttgttctttactaatgctggtaaagtttactcaaagaaagcatatgagattccagaa
tatggtcgtatggccaaaggcttgcctgtagttaacttgcttcaacttgaaaagggcgaa
aaggtacaaactgtaatcaacgttccagaaggagcagatgataattacttattcttcatc
actaagatgggtaccgtaaaacgcactcatgtcagtgaattttcaaacattagaaatagt
ggtttgattgctcttactttgcgtgatggggatgaattaagcaatgtccttactactgac
ggtaagcaaaacattttaattggtactcatttaggctatgcagtaacctttaacgaaaat
gatgttcgtgctatgggtagaactgctgcaggtgttcgcggaattaacttgcgtgatcat
gactatgtagttggttcaggcgtattagatgcagacgaccaggtattagtcatttctgaa
aatggttatggtaagcgtactccggctgcagaatatccagttaagggccgtggtggtaaa
ggtatcaagactgctaatatcactgaaaagaatggtccacttgctggcgtaattgtcatt
agcaagggcaaggacatcatggttatcactaccgatggtattatgattcgctttaagact
aaggatgtttctcaaactggacgtagcaccatgggtgttcgcttaatcaaggttagcgat
gatagtcaagttgcaagtttaaccattgttccatctgaagctgatcaagatcaagttgat
gatgaagatgacaatgatgataatgagtaa
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