Lactobacillus helveticus H9: LBH_0293
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Entry
LBH_0293 CDS
T03040
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
lhh
Lactobacillus helveticus H9
Brite
KEGG Orthology (KO) [BR:
lhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhh03400
]
LBH_0293
DNA repair and recombination proteins [BR:
lhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LBH_0293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
Lon_C
nSTAND3
RecA_N
AAA
SLFN-g3_helicase
AAA_16
AAA_14
GvpD_P-loop
AAA_24
AAA_22
NACHT
DUF7129
nSTAND_NTPase5
ABC_tran
RUBY_RBDX
CbiA
NTPase_1
RNA_helicase
NPHP3_N
ATPase_2
AAA_5
AAA_19
DUF2642
NB-ARC
divDNAB
HypA
Motif
Other DBs
NCBI-ProteinID:
AHI11324
LinkDB
All DBs
Position
304147..305523
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AA seq
458 aa
AA seq
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MARVKTQYKCRSCGYISASYLGRCPNCGAWNQFEKETEEVQKRSTKATASRLIQKTGLNE
PVHLDKIKAEKEERIPTKSEELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLHIMSDLAEK
YKVLYVSGEESANQIKLRADRLGVGQSNMLLYPETDMHDIREQINDVKPDFVVIDSIQTM
NEPSLDSMTGSASQVREVTSELMKIAKMDAITVFVIGHVTKEGAIAGPKILEHMVDTVLY
FEGDEHHTYRILHSVKNRFGSANEIGMFEMKNEGLREVTNPSSIFLDQRLPNSTGSAVVV
SLEGTRPLLAEIQALVTPTAFGYAKRTTSGISFNKASLLLAVLEKRGNLMLQNQDIYLTA
TGGIKLNEPAIDLAIAMSVASSYTDKEISPTDCFVGEVGLTGEVRRVDKIEARVKEAAKV
GFKRIFIPKHNMYQSLTENGIEVIPVASIPQALELVFG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctagagtaaaaacgcaatataaatgtcgttcctgtggttatatttcagctagttac
ttgggtcgttgtcctaactgcggtgcatggaatcaatttgaaaaagaaactgaagaagta
cagaaaagatctactaaagcaacggcaagccgtttaattcaaaaaacaggtcttaatgaa
cctgttcatttggataaaatcaaggctgaaaaagaagaacgaattcctactaagtccgaa
gaattaaatcgtgtattaggtggcgggatcgttcctggatccctcgtcttaattggtggg
gaccctggtattggtaagtcaactttaatgttgcatattatgagtgatctggcagaaaaa
tataaagtgctttatgtttcaggagaagagtcagctaatcaaatcaagctgagggcagat
cggcttggagttggtcaaagcaacatgcttttatatccagaaacagatatgcatgatatt
cgtgagcagatcaatgatgttaagcctgattttgtcgttattgattctattcaaacgatg
aatgaacctagtcttgattcaatgactggttctgcttcacaagtacgtgaggtaacaagt
gaattgatgaagattgctaagatggatgcaattactgtttttgttattggacacgtgact
aaagaaggtgcgattgctggcccaaaaattttggaacacatggtggatactgtcctttat
tttgagggggatgaacaccacacgtaccggattttgcattccgtaaaaaatcgttttggt
tctgctaacgaaatcggcatgtttgaaatgaaaaatgaaggcttacgtgaagtaaccaat
ccatcttcgattttccttgatcaaagattacctaattcaactgggtcagccgtagtagtt
tcacttgaaggaacgcggccacttttggcagaaattcaagcattagtaacgccaactgca
tttggctatgccaaacgaactacttcaggaattagttttaataaagcttcactattatta
gcggttcttgaaaaacgcggcaatttaatgcttcaaaatcaggatatttatttaacggct
actggcggtattaaattaaatgaacctgcaatcgatctagctattgctatgtcagtagca
tcaagctacaccgataaagaaatctcaccgactgattgttttgtaggggaagtgggatta
accggtgaagttcgccgcgttgataaaatcgaagctagagtaaaggaagctgccaaggta
ggttttaaacgtatttttattcctaagcataatatgtatcaaagtctaacggaaaatggc
attgaagtaattccagttgccagcattccacaggcattagaattagtttttggctag
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