Lactobacillus helveticus H9: LBH_1102
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Entry
LBH_1102 CDS
T03040
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lhh
Lactobacillus helveticus H9
Brite
KEGG Orthology (KO) [BR:
lhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhh03016
]
LBH_1102 (truB)
Enzymes [BR:
lhh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LBH_1102 (truB)
Transfer RNA biogenesis [BR:
lhh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LBH_1102 (truB)
Prokaryotic type
LBH_1102 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHI12097
LinkDB
All DBs
Position
complement(1155115..1156008)
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AA seq
297 aa
AA seq
DB search
MLNGILVIDKDKGMTSADVVYHLRKALYIRKIGHAGTLDPEVTGVLPIAIGQATKLIELM
HTRPKEYIGSGLFGYATDSYDSTGTVLKKTKLTQAFTSDDIQSHMNEFLGEIEQVPPIYS
AVKVNGKHLYEYAREGIAVERPKRKVDILQYDLTDKPVFNETEGQEKFDFRIKCSKGTYV
RSLVNDLGEKMNCPAVMTYLRRVASSGFDISQAVKLSEIEANPEKAVELIQPIDTFFKDY
PQIDLSEEKWLKAKNGAGISLEIDAKKVALRYNKKVKAIYEKKGKLYRPSLMLLQNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggaattttagttattgataaagacaaagggatgactagtgctgatgtagta
tatcatttgcgaaaagctttgtatattcgaaaaattggacacgctggtacacttgatccc
gaagtaaccggagtattgcctatcgcaatcggacaagcaactaagttaattgaacttatg
catactagacctaaagaatatattggtagtggtttatttgggtatgctacagatagttat
gattcaacaggtacagttttaaaaaagactaagctaactcaagcttttacttccgatgat
attcaaagtcatatgaatgaatttttaggtgaaatcgaacaagtaccgccaatttattca
gcagtaaaagtaaacggcaagcatttatatgaatacgctcgagaaggaattgcagtagaa
cgacctaaacgcaaagttgatattttgcaatatgatttgacagataaacccgtatttaat
gaaacagaaggacaagagaaatttgattttcgaattaagtgtagcaaaggtacttatgtc
agatcattagtaaatgatttaggtgaaaaaatgaactgtcccgcagtgatgacttattta
agaagagtagctagttctggttttgatatttctcaagcagttaaattaagtgaaattgag
gccaatcccgaaaaagcggtagaattgattcagccaattgatactttctttaaagactat
cctcaaattgacttaagtgaggaaaaatggcttaaagcaaaaaacggtgcaggtatttcg
ttagagatagatgctaaaaaggttgcattaaggtacaataaaaaagtcaaggcgatttat
gaaaagaaaggtaaattatatcgcccaagtttaatgttgcttcaaaatgagtaa
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