Lactobacillus helveticus H9: LBH_1144
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Entry
LBH_1144 CDS
T03040
Symbol
rnc
Name
(GenBank) Double stranded RNA-specific ribonuclease RNase
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lhh
Lactobacillus helveticus H9
Brite
KEGG Orthology (KO) [BR:
lhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhh03019
]
LBH_1144 (rnc)
03009 Ribosome biogenesis [BR:
lhh03009
]
LBH_1144 (rnc)
03036 Chromosome and associated proteins [BR:
lhh03036
]
LBH_1144 (rnc)
Enzymes [BR:
lhh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LBH_1144 (rnc)
Messenger RNA biogenesis [BR:
lhh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LBH_1144 (rnc)
Ribosome biogenesis [BR:
lhh03009
]
Eukaryotic type
90S particles
RNase
LBH_1144 (rnc)
Prokaryotic type
rRNA processing factors
LBH_1144 (rnc)
Chromosome and associated proteins [BR:
lhh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LBH_1144 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AHI12138
LinkDB
All DBs
Position
complement(1200360..1201046)
Genome browser
AA seq
228 aa
AA seq
DB search
MVSTKFLKKLKDEYSIEFNNEKLLEEAFTHSSYSNEHPNDGIRDYEKLEFLGDAVLELAV
SDYLYRHYPKLNEGELTRLRSNIVRTEGFSEFAIECGFQNEIHLGNGEEKAGARKRKTLL
EDVFEAFNGALFLDQGMPAVQHFLHLTVYPLIDKGEFDDSRDYKTDLQELLQQNGPVNIE
YSVISESQLPPHFVVELKINDQVQTQGEGHNKKAAEQQAAKAALQKLE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtacaaaatttttaaaaaaattaaaagacgaatatagtattgaatttaataat
gaaaaactattagaagaagcatttacacattcttcatattcgaatgaacatcctaatgat
gggattcgtgattatgaaaaattggaattcttaggtgatgctgttcttgaattagctgtt
tctgattatttgtaccgtcattatcctaaattgaatgaaggcgaattaacccgattaaga
tctaacattgttagaactgaagggttctctgaatttgcgattgaatgtggttttcaaaat
gaaattcacttaggaaatggtgaagaaaaagctggtgcacgtaagcgtaaaactttattg
gaagatgtttttgaagcatttaatggtgcattattcctagatcaagggatgccagcggtc
caacatttcttacatttaaccgtttatccattaattgataagggtgaatttgatgactca
cgtgattataagactgatttgcaggaattgttgcaacaaaacggacctgtcaatattgaa
tattcagtcattagcgaatcacaattgccaccacactttgtggttgagctaaagatcaat
gatcaagttcaaacacaaggtgaaggtcataataagaaagctgcagaacaacaagccgct
aaagcagctttacaaaaattagagtaa
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