Lactobacillus helveticus H9: LBH_1350
Help
Entry
LBH_1350 CDS
T03040
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lhh
Lactobacillus helveticus H9
Pathway
lhh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBH_1350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhh03400
]
LBH_1350
Enzymes [BR:
lhh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LBH_1350
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LBH_1350
DNA repair and recombination proteins [BR:
lhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LBH_1350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_Ribbon_Prim
NFACT_N
Zn_ribbon_8
Zn_ribbon_TFIIB
Zn_ribbon_6
Auto_anti-p27
ZNF512_C2HC
Zn_Ribbon_TF
HMBD
Motif
Other DBs
NCBI-ProteinID:
AHI12336
LinkDB
All DBs
Position
complement(1419387..1420217)
Genome browser
AA seq
276 aa
AA seq
DB search
MPEMPEVETVRRTLIPLIKGKTIEKVILWYPKIVATDHEKFLSELPGKKIIDIDRYAKYL
LIRLSDNLTIVSHLRMEGKYHLTTSDAPKDKHDHVEFIFTDGTALRYNDVRKFGRMQLIL
TGTERQTTGIGKLGYEPNSSEFTSEYLVNGLKRKKKNIKNTLLDQSVVAGLGNIYVDEVL
WRTKIHPLSQASKIPAEKVIELHDQINQIITEAIKLQGTTVHSFLNANGQVGGFQSKLQV
YGHVGEPCPVCGTKFEKIKVNGRGTTFCPHCQVIYK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaatgccggaagttgaaacggttcgaagaactttgattcctttaattaaagga
aaaactattgaaaaagtgattttgtggtatcccaaaatcgtagcgacagatcatgaaaag
tttttatctgaattacctggtaaaaaaatcattgatattgatcgttatgctaagtatttg
cttattcgtttgagtgacaatttgacgattgtttctcatttgcgaatggaaggaaagtac
catctaaccacatctgatgcgcctaaagataaacatgatcatgttgagtttatttttacg
gatggaacagccttacggtataatgacgtgcgcaagtttggtcggatgcaattaatttta
actggaactgaaaggcaaactacagggattggcaaattaggttatgaaccaaatagttct
gaatttacatcagaatatttggtaaatggcttaaaacgtaagaagaaaaatatcaaaaat
actttgcttgaccagtcagtagtggccggccttggcaatatttatgttgacgaagtcttg
tggcggactaagatccatcccttgagtcaggctagcaaaatccctgctgaaaaagtaatt
gaattgcatgatcagattaaccaaattattaccgaggcgattaaattgcaaggtacgact
gtccattcctttttaaatgcaaatggtcaagttggcggctttcaaagcaagttgcaagtc
tatggccatgtaggtgaaccttgtccggtttgcggcacgaagtttgaaaaaattaaggtt
aatggtcgaggtaccactttttgccctcattgtcaggtgatttataaatga
DBGET
integrated database retrieval system
