Lactobacillus helveticus H9: LBH_1351
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Entry
LBH_1351 CDS
T03040
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lhh
Lactobacillus helveticus H9
Pathway
lhh03030
DNA replication
lhh03410
Base excision repair
lhh03420
Nucleotide excision repair
lhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBH_1351
03410 Base excision repair
LBH_1351
03420 Nucleotide excision repair
LBH_1351
03440 Homologous recombination
LBH_1351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhh03032
]
LBH_1351
03400 DNA repair and recombination proteins [BR:
lhh03400
]
LBH_1351
Enzymes [BR:
lhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBH_1351
DNA replication proteins [BR:
lhh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LBH_1351
DNA repair and recombination proteins [BR:
lhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LBH_1351
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBH_1351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
DUF61
HHH_2
Polysacc_deac_2
DUF3698
Motif
Other DBs
NCBI-ProteinID:
AHI12337
LinkDB
All DBs
Position
complement(1420226..1422889)
Genome browser
AA seq
887 aa
AA seq
DB search
MADEKLLLIDGNSVAFRAFYALYRQLESFKSPDGLHTNAIYAFKNMLDVLLKDVDPTHVL
VAFDAGKVTFRTKMYGEYKGGRAKTPEELLEQMPYIQEMLHDLGIKTYELKNYEADDIIG
TFAAKGEKAGFTTTIVTGDRDLTQLASDKTTVEVTKSGVSQLEAYTPEHMKEVNGVTPTE
FIDMKALMGDNSDNYPGVEGIGPKTASNLIQEYGSVENLYDHIDEMKKSKRKERLIRDKD
KAFLAKKLATIDRDSPVTIDIDDVKREPVDYEKLRQFYEKMNFRKFLAELNASGAGQDGA
EVEKVEYTVLNDDNVKDVKATEKDTVEFYLEMLGANYHLADFVGFSLKINDKIYVSRDVE
LLEEDNIKHILEDEKIKKNVFDLKRSMVGAHRLGIHTHGLDYDMLLASYLVNNENNSNDL
GEIAHLYGDYSVKTDLEVYGKGKSEHIPDDDDELFNHLASKVNAIESLKKTLLEKLKDHE
QDALFDTIEIPTARVLARMEMNGMKVEASTLIQLQNEFAVKLKKLEDKIYGQAGEKFNLN
SPKQLGHILFEKLGLPVIKKTKTGYSTSVEVLDQLKTQSPIVSKILDYRQIAKIQSTYVK
GLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSEPDGYIF
SCDYSQVELRVLAHVSGDQNMQEAFKTGYDIHSHTAMKIFHLESPDEVTPLMRRHAKAVN
FGIVYGISDYGLSKNLGISRKRAQEFIDNYFEQYPQIEDYMNKAVQEARDKGYAETIMHR
RRYLPDIHAKKYTVRAFAERTAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVIQVH
DELIFDVPKDELETIKKIVPEVMQSAVKLDVPLIADSGWGHNWYDAK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaaaaattacttctaatcgatggtaactctgtagctttcagagccttttac
gctctttatcgtcaactagaatctttcaagagtccggacggcctgcacactaatgccatt
tacgcttttaagaacatgctcgatgtccttttaaaagacgttgatccaacccacgtattg
gtagcttttgatgcaggaaaagtcacttttagaacaaaaatgtatggtgaatacaaaggt
ggacgtgcgaaaactccagaagagttgctcgaacaaatgccttacattcaagaaatgctg
catgacttgggtattaaaacttatgaattgaagaattatgaagcagatgacatcattggt
acttttgctgcgaagggtgaaaaggccgggttcacaaccacgatcgtaactggtgaccgc
gacttgacccaacttgcgtccgacaagacgactgtcgaagtaactaagtctggtgtttct
caacttgaagcttatacaccagaacatatgaaggaagttaacggcgtcactccaaccgaa
ttcatcgacatgaaggccttgatgggtgataactctgataactacccaggtgttgaaggc
atcggtcctaagacagcttctaatttaattcaggaatatggttcagtagaaaatctttac
gatcatattgatgaaatgaaaaaatctaagcgtaaggaacgtttaattcgtgataaagac
aaggcctttttagctaaaaaacttgccacgattgatcgtgattcaccagttaccattgat
attgatgacgtaaaacgcgagccagttgattatgaaaagctgcggcaattctacgaaaag
atgaacttccgcaagtttttggcagaacttaatgcttcaggtgccggtcaagatggtgcc
gaagttgaaaaagtagaatacactgttttaaacgatgacaatgttaaagatgttaaagcc
actgaaaaagacactgttgaattttatctagaaatgctcggcgctaactaccacttagca
gattttgtcggctttagcttgaagatcaacgacaagatttatgtttcaagagatgtggaa
ttgcttgaagaagataatatcaagcacatcttagaagatgaaaagatcaagaagaacgtc
tttgacttaaagagatccatggttggggcccatcgtttaggcattcatacgcacggcctt
gattatgatatgcttttagcctcatatctagttaataatgaaaacaactctaatgatctt
ggtgaaattgcccatctttatggggattattccgttaagactgaccttgaagtctacggc
aaaggtaagagtgaacacatccctgatgacgatgatgaattattcaaccacttagcttct
aaggtcaacgccattgaatcactcaagaagactctgcttgaaaagctcaaagaccacgaa
caagatgccttgtttgatacgatcgaaatcccaaccgcgcgcgttttagccagaatggaa
atgaacgggatgaaggtcgaagcaagtactttaattcaactgcaaaatgaatttgccgtt
aaattgaagaaactcgaagacaagatttatggccaagccggcgaaaagttcaacttgaac
tcaccaaagcaattaggtcacattttgtttgaaaagcttggtttgccagtcatcaagaag
accaagactggttattcaacttcagttgaagtacttgatcaattgaagacgcaaagccca
atcgttagcaaaattttggactatcgtcaaattgccaagattcaatctacctatgtaaag
ggtctgcttgacgtcattcaaccagatggccgcgtgcacacacgttacttgcagactttg
actgcaactggtcgactttctagtgtggatcctaacttgcaaaacatccctacccgcacc
gaagaaggaaagcaaatcagaaaggccttcgtgccaagtgaaccagacggctacatcttc
tcttgcgactactcacaagttgaactccgtgtgctcgcccatgtttctggtgatcaaaac
atgcaagaagccttcaagaccgggtatgacatccactcacacaccgcgatgaagatcttc
cacttggagtcaccggatgaggtaacaccactgatgcgtcgtcacgccaaggcagttaac
ttcggtatcgtctacggtatttccgattatggtttgtccaagaatttaggtatttctagg
aaacgtgcgcaagaatttatcgataattattttgaacaatatcctcaaatcgaggattac
atgaataaagcagtacaagaagcacgtgacaagggctatgcggaaacgatcatgcatcgc
cgcagatatttgccagatattcatgctaagaagtacactgtgcgtgccttcgctgaaaga
accgcaatcaactcaccaatccaaggctcagctgccgatatcatcaagattgccatgatc
aacatgcaaaagaagcttgatgaattgcaccttaagaccaagatggttattcaggtgcac
gacgaattgatttttgatgtgccaaaagacgaactggaaacaatcaagaagatcgtgccc
gaagtaatgcaatcagcagttaagcttgatgtgccattaattgctgattctggttgggga
cacaattggtatgatgcaaagtag
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