Lactobacillus helveticus H9: LBH_1473
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Entry
LBH_1473 CDS
T03040
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lhh
Lactobacillus helveticus H9
Pathway
lhh03030
DNA replication
lhh03430
Mismatch repair
lhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBH_1473
03430 Mismatch repair
LBH_1473
03440 Homologous recombination
LBH_1473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhh03032
]
LBH_1473
03400 DNA repair and recombination proteins [BR:
lhh03400
]
LBH_1473
Enzymes [BR:
lhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBH_1473
DNA replication proteins [BR:
lhh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBH_1473
DNA repair and recombination proteins [BR:
lhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBH_1473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
BRCT
Motif
Other DBs
NCBI-ProteinID:
AHI12459
LinkDB
All DBs
Position
complement(1571785..1572738)
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AA seq
317 aa
AA seq
DB search
MSIYVKNGILHVDGAQDKLRQKGQEKPDFLSNYTMLDIETTGLSPFRDRITELGGVKVRN
GQIVDQYTNLVKFPKNNKVPAFITKLNGITEEQLTNEGIPAEQAIKEFREFIGDDTIVGY
NVNFDLNFLYDLSQKYNLPVLNNDYVDVLRLARVYYPRQHNRLIDCMQRAGIAQVEQHHG
LADSLDTIKVYNDFNQHFTEDLLEQAIGKIKNVDLTGDEVDYYQLGFRNPVQDKNIVLSG
NLHMDQRDAGKMINNMGGQLDQNVENTTNYLIMGDHDFFRKNNEDLNRARLLIKDGAKIK
RLSESFFLSMLDDWARS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttacgtaaaaaatgggattttacatgtagacggagcgcaagataagttacgc
caaaaaggtcaggaaaagccagattttttatctaactacacgatgcttgatattgaaacg
actggccttagccctttccgtgatcgcattaccgaacttggcggagtcaaggttagaaat
ggtcaaattgtcgatcaatacactaatttggtaaagttccctaaaaataataaggttcca
gctttcattactaaattgaatgggatcactgaagagcagcttactaatgaaggaattccc
gctgaacaagcaatcaaggaatttcgtgagttcattggtgatgacactattgttggctac
aacgtcaattttgacttgaactttttgtatgaccttagtcaaaaatataatttgccggtg
ctaaataatgattatgtcgacgtgctccgcttggccagagtctattatccacgccaacat
aatcgtttgattgattgcatgcagcgtgctggaattgctcaagtagagcagcaccacgga
ttggccgattcattggatactattaaggtttataacgactttaaccagcattttacagag
gatctgttagagcaagccattggcaagattaagaatgtcgatttgactggagatgaagtt
gattactatcagcttggtttccgcaatcctgttcaagataaaaatattgttttgtctggc
aatctccacatggatcagcgcgatgccggaaaaatgatcaacaatatgggcggtcaactt
gatcaaaatgtagaaaatactacgaattatttgatcatgggtgatcatgatttcttcaga
aaaaataatgaagatttaaatagagctcgtcttttgattaaagatggtgcgaaaattaag
cgtttatcagagagcttctttttatcgatgcttgatgactgggctcgcagctaa
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