Lactobacillus helveticus H9: LBH_1488
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Entry
LBH_1488 CDS
T03040
Name
(GenBank) ATP-dependent helicase-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lhh
Lactobacillus helveticus H9
Pathway
lhh03420
Nucleotide excision repair
lhh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LBH_1488
03430 Mismatch repair
LBH_1488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhh03400
]
LBH_1488
Enzymes [BR:
lhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBH_1488
DNA repair and recombination proteins [BR:
lhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBH_1488
MMR (mismatch excision repair)
Other MMR factors
LBH_1488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
UvrD_C
AAA_30
DEAD
NACHT
Shr-like_HID
DUF3052
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AHI12473
LinkDB
All DBs
Position
complement(1587920..1590163)
Genome browser
AA seq
747 aa
AA seq
DB search
MKQIKEREKSLKKSIKSAEGQARDLNSHFFDDVKLDYDGYSTSMETALSIHQQQQLLSER
EHAWQHSAKQLDTVERLEKRPYFARVDFKEQGEKKPETIYIGLGSFADKDNHFLIYDWRA
PISSIYYDGKLGEVSYNSPEGKITVDMTKKRQFMIEDGKIVNMFDTNESIGDQMLLEVLS
EKSSTQMKSIVTTIQQEQNKIIRNTSADLLFVQGAAGSGKTSAILQRIAYLLYRYRGNLT
SSDVIMFSPNQLFNDYIKNVLPEMGEQNMVQMTYWQFVARRLPGMNVENLFKQFEDQNSD
TNISKFKGSVNFFNLLTRYAKHLNKRGVIFKNIYFRDKKKPYFDKEKIKEIYYSYNENYN
LANRIDATREELIKMLNRKITPEVKKAWVARTIEGMSQSELNELYDRPDQEFESEAKEEA
FLGRKIVLKALKGMHKRILHNHFINMRAQYLSFLRAVPKMVNLAKWDITEDDWLHHIDEV
KENFKKHDIAITDVSAYLYLYDLITGRRTDYEMRYAFIDEIQDYTPFQLAYLKYNFPRAK
FTMLGDLNQAIFTKDESRSLLKQISGLFDPEKTDVVRLTKSYRSTKQLTNFTKQILRQGE
KIEAFNRQGPKPVIWGRDNDEKAIDVLVDVLRDNEKRKMTTVIITKDLASAKFVHEELSK
KKEPTTLIATANQRLVDGTLVIPSYLAKGLEFDAVVMWGANKENYHQLDETQLVYTITSR
AMYKLDVIYTGEKSPLLDVDPATYEEK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaatcaaagaacgtgaaaaatctttaaaaaagtcaattaaatcagctgaaggc
caagctagagatcttaattcacatttctttgatgatgttaaattagactatgatggctat
tcgacttcaatggaaactgccttgtcgattcatcaacagcagcaattattaagtgagcgt
gagcatgcttggcagcattcagctaagcagttggatactgtcgaaagactggaaaagcgg
ccatattttgctcgagttgattttaaggaacaaggggaaaagaagcctgaaactatctat
attggtctgggttcttttgctgataaagataatcatttcttgatttatgactggcgtgcg
cctatttcttcaatttattatgatggcaagttaggcgaagtatcttataattcgccagaa
ggtaagattaccgtcgacatgacgaagaagcgccaattcatgattgaagatggcaagatc
gtcaacatgtttgacactaatgaatcaatcggtgatcaaatgcttctagaggttttatct
gaaaagtcatcaactcagatgaaatcaatcgtaaccacgattcaacaagaacaaaataag
attattagaaataccagcgctgacttgctcttcgtgcaaggtgctgcaggttcaggaaag
actagtgcgattttgcaaagaattgcatacttgctttaccgctaccgtggtaatttaact
tctagtgacgttatcatgttcagtcctaaccaattgttcaatgattacattaaaaatgtt
ttgcctgaaatgggtgaacaaaacatggtgcagatgacatattggcaatttgtggcacgg
cgacttccagggatgaatgtggaaaacttgtttaaacaatttgaagatcagaattctgat
actaatatcagcaagttcaagggttcagtcaatttcttcaatttgttaacgcgctatgct
aaacacttgaataagcggggagtaattttcaagaatatctatttccgtgataagaagaag
ccttattttgataaggaaaagatcaaggaaatttattactcatataatgaaaactacaat
ttagctaatagaattgatgcaacgcgcgaagagcttattaagatgcttaatcgcaagatt
acaccagaagttaaaaaggcctgggttgctcgcaccattgaagggatgagtcaatcagag
ttaaatgaattgtatgatcgccctgatcaagaatttgaatcagaagctaaggaagaggct
ttcttaggcagaaagattgttttgaaagctttaaagggcatgcacaagcgcattttgcac
aatcactttatcaacatgcgtgcacaatacttgagcttcttgcgtgccgtacctaagatg
gttaatttagctaagtgggacattacagaagatgattggttgcatcatattgatgaagtt
aaggagaacttcaagaaacatgatattgctatcactgatgtttctgcctatctttacttg
tatgatttgatcactggtcgcagaaccgattatgaaatgcgttatgcatttattgatgaa
attcaagattatacgccattccaattggcttaccttaagtacaatttcccacgtgctaag
tttacgatgctcggtgatttgaatcaggccatctttactaaggatgagagtcgcagcttg
cttaagcagatttctggtttgtttgatccagaaaaaactgatgtggttcggcttactaag
tcctatcgttcaactaagcaattgactaattttaccaagcagattttgcgtcaaggtgaa
aagatcgaagccttcaaccgtcaaggtccaaaacctgtgatttggggaagagataatgat
gagaaggcaattgatgtcttagtcgatgttttgcgcgataatgaaaagcgtaagatgact
acagtcatcattaccaaggatttggctagtgctaaatttgtgcatgaagaattgagcaag
aagaaggaaccaaccactttgattgcgacagctaaccagcgtttagttgatggtaccttg
gtaattccttcataccttgccaaaggattagagtttgatgccgtagttatgtggggcgca
aacaaagaaaattatcatcaattggatgaaacccagttagtttacacgattacatctcgt
gcaatgtacaagttagatgtgatttatacaggtgaaaagagtccacttttagatgtagat
ccagctacttatgaagaaaaataa
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