Companilactobacillus heilongjiangensis: JP39_01830
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Entry
JP39_01830 CDS
T04057
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lhi
Companilactobacillus heilongjiangensis
Pathway
lhi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JP39_01830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhi03021
]
JP39_01830
03400 DNA repair and recombination proteins [BR:
lhi03400
]
JP39_01830
Enzymes [BR:
lhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JP39_01830
Transcription machinery [BR:
lhi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JP39_01830
DNA repair and recombination proteins [BR:
lhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JP39_01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ALB28215
UniProt:
A0A0K2LAC3
LinkDB
All DBs
Position
432547..436215
Genome browser
AA seq
1222 aa
AA seq
DB search
MIDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMAHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRNLEEIIYFASYVVIDPGETDLEKKQLLTETEYRKKREEFGNKFVAKMGAEGIRDLLS
QVDMAAEVKELRETLKSAQGQKRTRAIRRLDILSAFQKSGNKPEWMVMEAIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPTLKFYQCGLPRE
MALELFKPFVMHELVKREIASNVKNARRKIDRQDDDIWDVLEDVIKERPVLLNRAPTLHR
LGIQAFEPVLVDGKSMRLHPLACEAYNADFDGDQMAIHVPLSDEAQAEARMLMLAAHHIL
APKDGKPIVTPSQDVVLGNYYLTIETRHMTGEGKIFKDSNEVQTALLNGDIHYHTRIGIA
VDSMPNKPFKDDQRDKIMITSVGKVIFNEILPEDFPYLNEPTDDNLMHGVPDKYFLGKGE
DINKRLDEMDLIDPLKSGYLSDIIAQVFKIYRVQRTSSLLDDMKELGYTICTLSGLTVGV
TDVPNLTQKPEIIEKAHKQVASISKQFRRGLITDSERHDRVISVWNDTKDEIQQLLIDSF
DPTNPISMMSDSGARGNISNFTQLAGMRGLMAAPNGGMMEIPVISNFREGLSVMEMFMST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREEDCGTDRGLVVSSIMEGTDMIEPLY
DRLVGRYTQKTVKDPKTGDVIVPRGVLMDETIAQKVVDAGVTHVTIRSAFTCDTKHGVCK
KCYGRNLATGEEVEIGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGGDDITQGLPRVQEI
VEARNPKGLAIISEVDGIVTSIDENQAEHTKEITVEGETDSRSYSVPYTSSVAVAEGDHV
KRGGKLTQGSIDPKELIKVTNVLHTENYLLAEIQKVYRMQGVDISDKHFEVMVRQMHRKI
RILDPGDTDVLPGQLMDIAQFTDHNRETLFNGGIPATGRPVLLGITKASLETNSFLSAAS
FQETTRVLTDASIRGKNDPLLGLKENVIIGKLIPAGTGMAKYNHMEPKKVGPMADNSLNG
AYTISDIEAQMKAEDAAKSEKR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
ttgatagacgttaataaattcgaaagtatgcaaattggtttagcatctccggacaagatt
cgtagttggtcttatggagaagttaagaaaccagaaactatcaactaccgtactttgaaa
ccagaaaaagatggtctattcgatgaaagaattttcggaccaactaaagactgggaatgt
gcctgtggtaagtacaaacgtatccgttataagggtattgtttgtgaccgctgtggtgtt
gaagttactcgttcaaaggttcgtcgtgaacgtatggctcatatcgaattggctgcccca
gtatcacatatctggtacttcaagggtatcccatcacgtatgggacttgttttggacatg
agtccaagaaacttggaagagattatctactttgcatcatacgtagttatcgacccaggc
gaaacagatctagaaaagaaacaacttttaactgaaactgaatatcgtaagaaacgtgaa
gaatttggtaacaagttcgttgctaagatgggtgccgaaggtatccgtgatttacttagc
caagttgatatggctgctgaagttaaagaacttcgtgaaactctaaagagtgcacaaggt
caaaaacgtacacgtgctatcagacgtttggatattttgagtgccttccaaaaatcaggt
aacaaacctgaatggatggtaatggaagcaattcccgttatcccacctgatctacgtcca
atggttcaacttgaaggtggccgttttgccacttctgatttgaacgatttgtaccgtcgt
gtaatcaaccgtaacaaccgtttgaagagattgttggatcttaatgctcctaacatcatt
gttcaaaacgaaaagagaatgttacaagaagctgttgatgctttgatcgataatggtcgt
cgtggccgtcctgttacaggacctggtaaccgtccattgaagtcactttctcacatgctt
aaaggtaagcaaggacgtttccgtcaaaacttacttggtaaacgtgttgattattcagga
cgttcagttattgatgttggacctacattgaagttctatcaatgtggacttccacgtgaa
atggctttggaattgttcaagccattcgttatgcatgaacttgttaaacgtgaaattgct
tctaacgttaaaaatgctagaagaaagattgatcgtcaagatgatgatatctgggatgta
ctagaagacgttatcaaagaacgtccagtattgcttaaccgtgcccctacacttcacaga
cttggtatccaagcctttgaacctgttttggttgatggtaagtcaatgcgtttgcaccca
cttgcttgtgaagcttacaatgccgattttgatggtgaccaaatggctatccacgtgcca
ctatcagacgaagcccaagctgaagcacgtatgttgatgcttgctgcccaccatattctt
gctcctaaagatggtaagcctatcgttactccttcacaggatgttgttttaggtaactac
tatctaacaattgaaacaagacatatgactggtgaaggtaagatcttcaaggattctaac
gaagttcaaacagccttattgaatggtgatattcactatcacacaagaattggtatcgct
gttgattcaatgcctaacaagccattcaaggatgaccaaagagataagattatgattact
tctgttggtaaggttatctttaacgaaattcttccagaagatttcccatacttgaatgaa
ccaactgatgacaacttgatgcacggtgttcctgacaaatacttccttggcaaaggtgaa
gacattaacaaacgtcttgacgaaatggatttgattgacccattgaagagtggttatcta
tcagatatcattgcccaagtattcaagatttatcgtgttcaaagaacatcatcattgctt
gatgacatgaaagaattaggttacacaatttgtacactttctggtttaacagtcggtgtt
acagatgttcctaatttgactcaaaaacctgaaattattgaaaaggcccacaaacaagtt
gcttcaatttctaagcaattccgtcgtggactaatcactgactcagaacgacacgatcgt
gttatcagtgtttggaacgatacaaaggatgaaattcaacaattgttgattgattcattt
gatcctacaaaccctatctcaatgatgtctgattctggtgcccgtggtaacatctcaaac
tttacacaacttgccggtatgcgtggacttatggctgcccctaatggtggtatgatggaa
atcccagttatttctaacttccgtgaaggcctatcagttatggaaatgttcatgtcaacc
cacggtgcccgtaaaggtatgaccgatacagcgttgaagacagctaactcaggttacttg
actcgtcgtttggttgatgttgcgcaagatgttattgttcgtgaagaagattgtggtact
gaccgtggacttgttgtaagttcaattatggaaggtacagatatgatcgaaccattgtat
gacagacttgttggtcgttatacacaaaagacagttaaagatcctaagacaggcgacgta
atcgtacctcgtggtgtcttgatggatgaaaccattgctcaaaaggttgttgacgctggt
gttactcacgttacaattcgttcagcattcacatgtgatacaaaacatggtgtatgtaag
aagtgttacggtcgtaaccttgctactggtgaagaagttgaaattggtgaagcagttggt
actgttgctgctcaatcaatcggtgaaccaggtacacaattgacaatgagaaacttccat
accggtggtgttgctggtggtgacgatattacacaaggacttcctcgtgttcaagaaatc
gttgaagctagaaaccctaaaggtcttgctatcatttcagaagttgatggtattgttaca
tcaatcgacgaaaaccaagcagaacacactaaggaaattactgtcgaaggtgaaactgat
tctagatcttatagtgttccttatacatcaagtgttgcggttgccgaaggtgatcacgtt
aaacgtggtggtaagttaacacaaggatcaatcgaccctaaggaattgatcaaagttaca
aacgttctacatacagaaaactatttgcttgctgaaattcaaaaagtttaccgtatgcag
ggtgttgatatctctgataagcactttgaggttatggttagacaaatgcacagaaagatc
cgtattcttgatcctggtgacacagatgtattgcctggtcaattgatggatattgctcaa
tttactgaccataaccgtgaaacattgtttaatggtggtattccagctactggacgtcct
gtccttcttggtatcactaaggcttctcttgaaacaaacagtttcttgtcagccgcttcc
ttccaggaaacaacaagagttcttactgacgcttcaattcgtggtaagaatgatccactt
cttggacttaaggaaaatgttattattggtaaacttatccctgccggtactggtatggct
aagtacaaccacatggaaccaaagaaagttggtcctatggcagataactcattaaatggt
gcctacacaatttctgacatcgaagctcaaatgaaagctgaagatgcagctaaatcagaa
aaacgttaa
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integrated database retrieval system
