Companilactobacillus heilongjiangensis: JP39_03090
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Entry
JP39_03090 CDS
T04057
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lhi
Companilactobacillus heilongjiangensis
Pathway
lhi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JP39_03090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhi03400
]
JP39_03090
Enzymes [BR:
lhi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JP39_03090
DNA repair and recombination proteins [BR:
lhi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JP39_03090
Prokaryotic type
JP39_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
ALB28427
UniProt:
A0A0K2LAU3
LinkDB
All DBs
Position
672384..673079
Genome browser
AA seq
231 aa
AA seq
DB search
MKNLIKNDWQEVLNSEFDKPYYEKLREFLVNEYNTQTIYPEMHKIYQAFDWTPFSETKVV
ILGQDPYHEPNQAIGCSFAVAPGITIPPSLRNIYKELQDDLGCTPVNHGYLKSWAKQGVL
LLNSVLTVRRGQANSHKGQGWEELTDYAIHALSERGGVVFLLWGNAAKSKIPLIDETKNT
VISSTHPSPFAARYGFFGSKPFSKANQALLNYNEEEINWQLPESADETEEK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaacttaataaaaaatgattggcaagaagttttaaatagtgaatttgacaaaccg
tattatgagaaattgcgcgaatttcttgtaaacgagtacaatacacagactatttatccg
gaaatgcataaaatttatcaagcctttgactggacacctttttcagaaactaaggttgtt
attttaggacaagatccatatcatgaaccaaatcaagctatcggttgcagttttgcggtc
gcaccgggaataacgattccaccatcattgcgcaatatttacaaagagttgcaagatgac
cttggttgtactccagttaatcacggttatttgaagtcttgggctaaacaaggtgttcta
ttgttgaactcggttttaacggttagacgtggacaggctaactctcacaagggtcaaggc
tgggaagaactaactgactatgcgattcatgctttatcagagcgtggtggagttgtcttc
ctattatggggcaatgcggctaagagcaaaattcctttgattgatgaaactaagaacact
gttatctcatcaacacaccccagtccatttgctgctcgctatggcttctttggttccaag
ccattttctaaagcaaatcaagctcttttaaactataatgaagaagaaattaattggcaa
ttacctgaaagtgccgatgaaacggaggaaaagtaa
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