Companilactobacillus heilongjiangensis: JP39_04735
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Entry
JP39_04735 CDS
T04057
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lhi
Companilactobacillus heilongjiangensis
Pathway
lhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JP39_04735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhi03400
]
JP39_04735
Enzymes [BR:
lhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JP39_04735
DNA repair and recombination proteins [BR:
lhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JP39_04735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
PIF1
UvrD-helicase
HHH_5
AAA_12
nSTAND3
UvrD_C
AAA_29
SLFN-g3_helicase
Herpes_Helicase
AAA_28
AAA
AAA_23
RsgA_GTPase
AAA_16
cobW
T2SSE
AAA_17
NPHP3_N
NTPase_1
MMR_HSR1
AAA_5
TsaE
DUF815
DUF4926
Motif
Other DBs
NCBI-ProteinID:
ALB28718
UniProt:
A0A0K2LC11
LinkDB
All DBs
Position
1028646..1031051
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AA seq
801 aa
AA seq
DB search
MTESDEKPYFLGTVKAIFFENPENLYKIFTIKVKKTNTGWDGGDIVVTGSFGEIVEEEEY
RFEGEIVDHPKYGQQFKATTYKRSRPNGRKQLIAFFSSEEFPGIGKKKAEKIVDTLGEDA
IDKILQDPHALDFLKLGEEKTQNIVEQISSNHQTEQVLYQLNNYGFGPTLSARIFQKYGA
QTLDKLTEDPYQLVIDVKGVGFKRADELAKRLGITGDDPRRIKGALIQMVTLIVNETGDT
YVDGQDLIHRVGSILRANSTDDLQQKLLDGLRNLVKDGVLVVENGNVYEKDLADSEWSIA
QSLKMITDSFKGVAWKKKAMKKELHQIESDFNVKYDESQEKAIEQSLTAPIFLLTGGPGT
GKTTIINAIVAAYAKLNDMPLEPESKEYAIALAAPTGRAAKHMGESTGLPAMTIHRLLGL
TGTEDDEFAEPSLDCKLLIIDEMSMVDTKLFKVLISAVQPGTQIVLVGDRDQLPSVGPGQ
VFADLINSEVFPTMILKNIHRQDEDSTIIQLAHDINEGVIVDGIFENRADRSFINCNSRD
VPHVLSQIISKSGERGFDIADVQVLAPMYRGTAGIDNLNYVIQNVVNPMTPKRKEVSMGN
IKYRIKDKVVYLVNTPEDNVFNGEIGQIVGIILAKENTDKVDKLVIDFDGNEVTLDRKDW
LNITLAYCTSIHKSQGSEFEMVILPLVNEESRMLRRNLLYTAVTRAKRLLIMVGDRSAFE
RSIRDQSSERQTTLKERIFTSFKIKQPETETESPDEEVEPEETEPKDYRLTLDMVMNNAI
NPMIGMDGVIPSDFMKEDKAV
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaagtgacgagaaaccatatttcttgggtactgtcaaagccatcttttttgaa
aatcccgaaaatctctataagatctttacgattaaagttaagaaaaccaatactggctgg
gacggtggcgatatcgttgttactggtagttttggcgaaattgttgaagaagaagaatat
cgttttgaaggcgaaatcgttgatcatcctaaatatggtcaacaatttaaagctacaacg
tacaaacgtagtcgtcccaatggtcgtaagcaattaatagctttcttttcgagtgaagag
ttccctggtattgggaagaaaaaggcggagaaaattgttgatacattgggtgaagatgcc
atcgacaagatcttacaggatccgcatgccttggattttctaaaacttggtgaagagaaa
actcaaaatattgtggaacaaatttccagcaatcatcaaacagaacaagttttatatcaa
ttgaataattacggctttggtccaacgttgagtgctcgtatttttcaaaagtatggtgcg
caaacactcgataaattgactgaggatccgtatcagttggtcattgatgtcaaaggtgtt
ggatttaaacgtgctgatgaattggcaaaacgcttaggtattacgggcgatgaccccaga
cgtatcaagggtgccttgattcaaatggtgaccttaattgtcaatgaaacaggtgacacg
tatgtcgacggtcaggatttaatccatcgtgttggcagtattttgcgtgctaattcaact
gatgatttacaacaaaaattacttgatggtttacgtaatttagttaaagacggcgtactg
gtagttgaaaatggcaacgtctatgaaaaagatttggctgatagcgaatggtctattgcc
caatctttgaagatgattactgacagtttcaaaggcgtggcttggaagaaaaaggccatg
aagaaggaattgcatcagattgaatcggatttcaacgttaaatatgatgagtcgcaagaa
aaagcgattgaacagtctttgacagctccgatatttctactcacaggtggtcccggaact
ggtaaaacaaccatcattaatgccattgtcgcagcctatgccaagttaaatgacatgcca
cttgaaccagagtccaaagagtatgcaattgctctagcggctcctacaggacgtgcagct
aaacatatgggcgaatcaactggtttgccagcgatgacgattcatcgtttgttaggatta
actggtaccgaggacgatgaatttgcggaaccaagtttagattgtaaattgttgattatt
gatgaaatgtcgatggtcgatacgaaattatttaaagttttaatttccgccgttcaacca
gggacacaaatcgtcctagtaggtgaccgtgatcagttgccatcagttggacccggtcaa
gtctttgctgatttgatcaacagtgaagttttcccaactatgattttgaaaaatattcac
cgtcaggatgaggattcaacgattattcagttggctcatgatattaatgaaggtgttatc
gttgatggcatctttgaaaatcgagctgatagaagttttatcaactgtaatagtcgtgat
gtaccacatgttttgtcacagattatcagcaagtccggtgaacgtggcttcgatattgcg
gatgtccaagtgttggcgccaatgtatcgtggtaccgctggaatcgacaatttgaattat
gtgattcaaaacgttgttaacccaatgacacctaagcgtaaagaggtttcgatgggtaac
atcaagtatcgaatcaaagataaggtcgtttatttagttaatacgcctgaggataatgtt
ttcaatggtgaaattggtcagattgtcggaattattttggcaaaagaaaatactgacaaa
gttgataaattagttatcgattttgatggcaatgaagtgactttggaccgtaaggattgg
ctcaatatcaccttggcttactgtacttcaattcataaatcacaaggttctgagttcgaa
atggttattttgccactagtgaatgaagaatcacggatgttacgtcgtaatttgttgtat
acagctgttacacgtgctaagcgtctgttgattatggttggtgaccgtagtgcgtttgag
cgttcaattagagatcagtcgagtgaacgtcagacgactttgaaggaacgaatctttact
agttttaagattaagcagccggaaacagagactgaatctcctgatgaagaagttgaacca
gaagagactgaaccaaaggattatcgcttaacacttgatatggttatgaataatgcgatt
aatccgatgattgggatggatggcgttatacctagtgactttatgaaggaagataaggca
gtttaa
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