Companilactobacillus heilongjiangensis: JP39_05550
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Entry
JP39_05550 CDS
T04057
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lhi
Companilactobacillus heilongjiangensis
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhi03032
]
JP39_05550
03400 DNA repair and recombination proteins [BR:
lhi03400
]
JP39_05550
Enzymes [BR:
lhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JP39_05550
DNA replication proteins [BR:
lhi03032
]
Prokaryotic type
DNA Topoisomerases
JP39_05550
DNA repair and recombination proteins [BR:
lhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JP39_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALB28867
UniProt:
A0A0K2LC38
LinkDB
All DBs
Position
1208339..1210426
Genome browser
AA seq
695 aa
AA seq
DB search
MPSTKQKNLVIVESPSKAKTIEKYLGRNYHVVASLGHVRDLPKSQMGVDIEHDYEPKYIS
IRGKGPVIKDLKKEAKKAKRVYLAADPDREGEAIAWHVSHLLGLEDDGKNRVVFNEITKD
TVKQAFKSPRSIDMNLVDAQQARRVLDRLVGYSISPILWAKVKKGLSAGRVQSIALKLVI
ERENDIKKFIPEEYWTIESVFKHDKDKFKANFYGLNGKKAELKDNAQVQEVLGKIDKKKD
FNIDKVTKKERKRMPAAPFTTSSLQQEANKRLNFKTRKTMMIAQQLYEGINLGRKEGTVG
LITYMRTDSKRISKVAEAEASKFIHEEYGEPFAIVKERKDKNQEGAQDAHEAIRPSSVFR
TPASLKEILSRDQFRLYSLIWSRFVASQMTPAVFDTMTVDLSQNGVMFRANGSKIKFEGY
RKVYQSTSDTSKKDNILPELNEGDSAKLQKNDPAQHFTQPPARFTEASLVKALEENGVGR
PSTYAPTIDTIQRRYYVKLNGKSFEPTELGEIVDNLIQDYFPDIVNIDFTAHLEDELDEI
EEGKEDWVKVVDHYYKPFAKELESAEDKIEKVQIKDEPAGMDCDICGAPMVIKMGRYGKF
YACSRFPDCRNTKPIVKEIGVVCPKCKKGQVIERKSKKNRIFYGCSRYPDCDFVSWDKPI
GRDCPKDGHYLVEKKVKGGRQVICPNGDYEEDIQK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgccatcaactaagcaaaagaatttggtgattgttgaatcaccttcaaaagcaaaaact
atcgaaaaatatttgggacgtaattatcacgtagttgccagtttgggtcacgttcgtgat
ttacctaagagtcagatgggtgtcgacatcgaacatgactacgaaccaaaatatatttct
attcgtggtaaaggtccagttataaaagatctcaaaaaagaagcaaaaaaagccaaacgt
gtttatctggcagccgatccggatcgtgaaggggaagccattgcctggcatgtctcacat
ttactaggtttggaagatgacggaaagaaccgtgttgtctttaacgaaattactaaagac
accgttaaacaagcttttaaatcacctcgttcaatcgatatgaacctcgttgatgctcaa
caagcacgtcgtgttttagatcgtttggtaggttactcaatttccccaatcctttgggct
aaagttaagaaaggcctcagtgccggtcgtgttcaatcaatcgctttgaaattagtgatt
gaacgtgaaaatgacatcaagaagtttattcctgaagagtactggactattgaatcagtt
ttcaaacatgataaagataaattcaaagctaacttttacggattaaacggtaaaaaggct
gaattaaaagataatgctcaagtacaagaagtattgggtaaaatcgataagaaaaaagat
ttcaatattgataaagttactaaaaaagaacgtaaacgtatgccagctgctccatttaca
actagttcgttgcaacaggaagctaacaaacgtttaaacttcaagactcgtaagaccatg
atgattgctcaacaactatatgaaggaatcaacttgggacgtaaggaaggtactgttggt
ttaattacttatatgcgtactgattccaagcgtatttcaaaagtcgctgaagcagaagct
tctaagtttattcatgaagaatacggtgaacctttcgcaatcgtcaaagaacgtaaggat
aagaaccaagaaggtgcacaagatgcccatgaagctatccgtccatcttcagtattccgt
acaccagcttcactaaaagaaattcttagccgagaccaattcaggctttacagcttgatc
tggtcaagattcgttgccagccaaatgacaccagctgttttcgatacaatgacagttgac
ttgtcacaaaatggcgtaatgtttagagctaacggttcaaaaattaagtttgaaggttac
cgcaaggtttaccaaagcacatctgatacttctaagaaggataatattcttcctgaatta
aacgaaggcgacagtgctaaattacaaaagaacgatccagcacaacattttactcaacca
cctgcaagatttactgaagcatcacttgttaaggctttggaagaaaatggtgttggtcgt
ccatcaacttatgcaccaacaattgatacgattcaacgtcgttactatgttaaattgaat
ggtaagagttttgaaccaactgaattaggtgaaatagttgataatttaattcaagattat
ttcccagatatcgttaatatcgactttactgctcatttggaagatgaactcgatgagatt
gaagaaggcaaagaggattgggtcaaggttgttgaccactattacaagccttttgctaaa
gaacttgaatcagctgaagataaaatcgaaaaggtccaaatcaaagatgaaccagccggc
atggattgtgatatctgtggtgcaccaatggttatcaaaatgggtcgttacggtaagttc
tacgcttgttcacgtttcccagattgtcgtaatactaagccaatcgttaaagaaatcggt
gttgtttgtcctaaatgtaagaaaggccaagttattgaaagaaaatcaaagaagaatcgt
attttctatggttgttcaagatatcctgactgtgacttcgtttcatgggataaaccaatc
ggtcgtgattgtcctaaagatggccactaccttgttgaaaagaaggttaagggtggtcgt
caagtaatttgtccaaacggagattatgaagaggatattcaaaagtaa
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