Companilactobacillus heilongjiangensis: JP39_05825
Help
Entry
JP39_05825 CDS
T04057
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lhi
Companilactobacillus heilongjiangensis
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhi03400
]
JP39_05825
Enzymes [BR:
lhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JP39_05825
DNA repair and recombination proteins [BR:
lhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JP39_05825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
DEAD
AAA_12
ResIII
DUF2059
AAA_16
AAA_30
AAA_22
ParE_like
TP6A_N
Motif
Other DBs
NCBI-ProteinID:
ALB28917
UniProt:
A0A0K2LC88
LinkDB
All DBs
Position
complement(1272538..1276218)
Genome browser
AA seq
1226 aa
AA seq
DB search
MPKWTADQKKAIEHRGHDILVSAAAGSGKTTILIERILRELIGDEDHQPEDIEHLLVVTF
TEAAAQEMKEKLLRALKKEVNKTQDSEIKHHLQKQIYHVPMANISTIHAFCLSVIKKFYY
VIDLDPNFRLLSDDTEKSIIQEQAYDLIRDEYYSKDDADFIDLTNNFTNDRSDDGLKDVI
FKTYDFAITNRDTDTWLDNLVTPYQFKDSFIETDFYKQEFLPQIKQRLEDLRQYNRETVD
FVGNDELANSYMPVLRERDEKIGHLEESMSQMSYQELREELMTFKIDAKKDKVGKADKEG
KDDTLMKAAGKMASNFTTRRNKLIEDYFMRSEDEINQSLRDAEGLINKLVEVERRFIKKF
DDLKTNSHVLDFNDLEHKAVDILNGAVDGRKIAQEFYQNKFNELMIDEYQDVNEMQDRIV
DLLSCDSNHRFMVGDIKQSIYGFRQAAPRLFTEKYDRFQRDDNDAELVQLSKNFRSSKAV
DDFVNQIFTRIFDKQIGDIDYDEKAKLVTGTSFPDSVDTENEFNVYLAPDDEDDGEEPTD
ELNEESLSNQAEISKRQTLISAAATKIQSLISSGFEIYDSKMDKDTEAEKIRPLKYSDIA
ILARTRDNNTDIVSYFSKVNVPVMVTDAQNYFQTTELQIMMAMLNIVDNPYQDIPLVAVL
RSPIVGLNEEELAEIRLVDKRNMYYTAIQKYLNQEDANEHIQNKLKSFLLQLENYRDFAN
KNSIARLIWKIYQETGLLEYVSGMPGGKQRAANLHALYQRANAYEENNFKGLHQFISFIQ
RMQDLDKDLAQPNSIEANDDTVKVMTVHGSKGLEFPIVMYLDMSKNFNMMDVNSNTVFDA
QKGIGITLADNETRLQYRTMQRGVISNQKKISTVSEEMRLLYVALTRAKQKLIMFGFAKD
ESKLFQAFDKPATGGLLNASARLGANNFQNLVGMSTLNGVDTEEYYDDEIKLRFNVIPVA
ATTNQAKEIIIPKAAPEPINETFKKSVSGILDFKYPYQESVETTAYQSVSEIKGLFADPD
DENMAEDLLEDRYRYNLGSFDKPQFLTQSKKVTNTEVGSATHLVLQKISIEKTPTVVDFD
ELIQDLVNQKLLTDELAEKIDRQGLADFYQSDLGQLIVQNHERVSREFPCSILMPAEKLF
KTDIKDYSTNDKILVHGIIDGVIELDSGITIFDYKTDHVTAENHSELISKYSGQVNLYAE
AISAIKNQPVEGKYLYFLKTNEAVSL
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatggactgctgaccaaaaaaaagcgattgaacaccgtggacatgatatttta
gtttcagctgcggctggttctggtaaaacaacaattctaatcgagcgtattttgcgtgaa
ctaattggtgacgaagatcatcagccagaagatattgaacatttacttgtggtaactttt
actgaagctgcagcacaggaaatgaaagaaaaactcttacgagctttgaaaaaagaagtc
aataagactcaggattcggaaattaaacatcatttacaaaaacaaatttatcatgtaccg
atggctaatatcagtacgattcatgcgttttgcttgagtgttatcaagaagttttactac
gtgattgacctcgatccaaacttccgtttgttaagtgatgatactgaaaagtcgatcatt
caagagcaagcttatgatctgattcgcgacgaatactacagtaaagacgatgccgatttt
atcgacttgactaataactttaccaacgaccgctctgatgatggtttaaaggacgttatt
tttaaaacttatgattttgcgattactaaccgagacacggatacctggttggataatttg
gtgacgccttaccaatttaaagatagttttattgaaacagacttttataagcaagagttc
ttgccccaaatcaaacaaagactggaagatttacgtcagtataaccgtgagactgttgac
ttcgtgggtaacgatgaattagcaaactcatatatgcctgttttaagagaacgtgatgaa
aaaattggtcatttggaagagtcaatgtcacagatgtcctatcaagagttacgtgaagaa
ttgatgaccttcaagattgatgctaagaaggataaagtgggcaaagccgacaaagagggt
aaagatgacaccttgatgaaggctgcaggaaaaatggcttcaaactttaccacacgccgt
aacaaattaattgaagattatttcatgcgttctgaagatgaaatcaatcaatctttacgt
gacgctgaaggattaattaataaattggtcgaagttgaacgtcgtttcatcaagaagttc
gacgatttaaaaaccaacagtcatgtactagatttcaatgatttagaacataaagctgtt
gatatccttaacggtgcggttgatggccgtaagattgctcaagagttctatcaaaataaa
tttaacgaattaatgattgatgaatatcaagatgttaatgaaatgcaggatcgaatcgtt
gatcttttgtcgtgtgacagcaatcaccgtttcatggttggtgatatcaaacagtcaatc
tatggattccgtcaagctgctcccagactatttacggaaaagtacgaccgtttccaaagg
gatgataatgacgccgaattagttcaattatccaaaaacttccgttcttctaaagcggtt
gatgactttgttaaccaaattttcacacgaatttttgacaagcaaattggtgatattgat
tatgatgaaaaagctaaattggtgacgggaaccagttttccggacagtgtcgacactgaa
aatgagtttaacgtttatttagcacccgatgacgaagatgacggtgaagaaccaactgac
gagttgaatgaagaaagtctcagtaatcaagctgaaatcagtaagcgccaaacgttgatc
agtgctgccgcaactaagattcaatccttgattagcagtggttttgaaatatacgatagc
aaaatggataaggacactgaagcagaaaagattcgtcctttgaaatattctgacattgca
attttggctcggactcgtgataacaataccgacattgtgtcttatttctcgaaggtcaat
gtgccggtaatggtaactgatgctcaaaactatttccaaacgacggaattacaaatcatg
atggcaatgcttaacattgttgataatccatatcaagacatccctttggtggctgttttg
cgttcgccaatcgttggcttgaatgaggaagaattagctgaaatccgtttggtcgacaaa
cgaaatatgtattacacagcaattcaaaagtatttgaatcaagaagacgctaatgaacat
attcaaaataagttgaaatcgttcttgctacaattggaaaactatcgcgactttgctaat
aaaaatagtattgctcggttgatttggaaaatttatcaagaaactggtctgttggaatac
gtttcagggatgcctggtgggaaacaacgtgctgctaatttgcatgctttataccaacgt
gccaatgcctatgaagaaaataatttcaaaggattgcaccaattcatcagttttattcaa
cgaatgcaagaccttgataaggatttagcgcaaccaaatagtattgaagccaatgatgat
accgtcaaagttatgacagttcacggctctaaaggcttggagtttccaattgtcatgtat
ttggatatgagtaagaacttcaatatgatggatgttaactccaacacagtctttgatgcc
caaaaaggtattgggattaccttggctgataacgagacacgtctgcaatatcgaactatg
caacgtggcgtgattagtaatcaaaagaaaatctcgaccgtttctgaagaaatgcgcctc
ttgtacgttgctttaacacgtgctaagcaaaaattgatcatgttcgggtttgcaaaagat
gaatctaagctatttcaagcatttgataaaccagcaaccggtggactacttaatgcttca
gctagacttggtgctaacaatttccaaaacttagttgggatgagtactttgaatggtgtc
gatactgaagagtattacgatgacgagattaagctgcgttttaacgtcataccagttgcc
gccacaaccaatcaagctaaagaaatcattattcctaaagctgctccggaaccaatcaat
gaaacatttaagaagtcagtttctggaattctagatttcaaatatccatatcaagaatca
gttgaaacaaccgcataccaatctgtttccgaaattaagggcttattcgccgatccagat
gatgagaatatggctgaagatttactcgaggaccgttatcgttataacctcggttcattt
gacaaaccgcaatttttgacacaatcaaagaaagtaacgaatactgaagtaggtagtgca
acgcacttagtcttacaaaaaatttctattgaaaaaactccaacagtcgttgactttgac
gaattgattcaagatttggtcaaccaaaaattattgacggatgaattagctgaaaaaatt
gaccgacaagggttagccgacttttaccaaagtgatttaggacagttaatcgttcaaaat
catgagcgtgttagtcgtgaatttccttgttcaatcctgatgccggccgaaaagttgttc
aaaaccgatatcaaagactattccactaacgataaaatattagttcatggtattattgat
ggtgtgattgaattggacagcggaataacgatttttgactataagacggatcatgtcaca
gctgaaaatcattcggaattaatttcgaaatattctggacaagtcaatttatatgcagag
gcaatctctgccattaaaaatcaacccgtagagggtaaatatctttatttcttgaagact
aacgaagcagtcagcctttag
DBGET
integrated database retrieval system
