Companilactobacillus heilongjiangensis: JP39_05995
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Entry
JP39_05995 CDS
T04057
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lhi
Companilactobacillus heilongjiangensis
Pathway
lhi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JP39_05995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhi03400
]
JP39_05995
Enzymes [BR:
lhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
JP39_05995
DNA repair and recombination proteins [BR:
lhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JP39_05995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALB28946
UniProt:
A0A0K2LCC1
LinkDB
All DBs
Position
complement(1315605..1316504)
Genome browser
AA seq
299 aa
AA seq
DB search
MIIGSHVAMKAPKMLVGSAEEAHSYGANAMMIFTGAPQNTRRKDVSEMRIPEGQALLKEY
GIDHIIGHAPYIVNLGNTVKPDKLPFGISFMHDEFLRADALGIEAISFHPGAHLTAEPDV
ALKQIGQALNEAIMPNQKVSVAIETMAGKGTEVGITFEQIAEIFDNCQQNDKLSVTMDTC
HMSDAGYDVKNDFDGVLNEFDHIIGLDKLSVIHLNDSKNDMGSHKDRHDDIGFGKIGFDA
LSYVAHHPQLENVPKIMETPYVKKDENDKKGVAPYKAEIEMLRNNVFDPEMKNKLIAGE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgataattggttcacatgttgcaatgaaagcacccaagatgcttgtcggttcagccgaa
gaagcacacagttatggcgccaacgcgatgatgatttttactggtgccccacaaaataca
cgtcgtaaggacgtttcagaaatgaggattcctgaaggacaggcacttttgaaagaatac
ggaattgaccatattatcggtcacgctccatatattgttaatcttggtaacaccgttaag
ccggataaactaccgtttggaatttcgtttatgcacgatgagtttttacgtgccgatgca
ttgggaattgaggctatcagttttcaccccggagcacatttgactgccgaaccagatgtt
gctttgaaacaaattggtcaagccctaaatgaagctatcatgcccaatcaaaaagttagt
gtagcgattgaaactatggcaggtaagggaactgaagtcggaattactttcgaacaaatt
gctgaaattttcgataattgccagcaaaatgataagctatccgtcacaatggatacttgt
cacatgagtgatgctggttacgatgttaaaaatgattttgatggtgtgttgaatgaattt
gaccatatcatcggtttggacaaattatcagttattcatttgaatgattcaaagaacgat
atgggttcacacaaggaccgtcatgatgatattggctttggtaagattggctttgacgct
ttgagctatgttgcacatcatccacagttggaaaatgtgcctaagattatggaaacccct
tatgttaaaaaagatgaaaatgacaaaaagggtgtcgctccttataaagcggaaattgaa
atgttacgtaataatgtgtttgatccagaaatgaagaataaattgattgctggagaatag
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