Companilactobacillus heilongjiangensis: JP39_06605
Help
Entry
JP39_06605 CDS
T04057
Symbol
polC
Name
(GenBank) DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lhi
Companilactobacillus heilongjiangensis
Pathway
lhi03030
DNA replication
lhi03430
Mismatch repair
lhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JP39_06605 (polC)
03430 Mismatch repair
JP39_06605 (polC)
03440 Homologous recombination
JP39_06605 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhi03032
]
JP39_06605 (polC)
03400 DNA repair and recombination proteins [BR:
lhi03400
]
JP39_06605 (polC)
Enzymes [BR:
lhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JP39_06605 (polC)
DNA replication proteins [BR:
lhi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JP39_06605 (polC)
DNA repair and recombination proteins [BR:
lhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JP39_06605 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
HHH_3
DUF655
T2SSK
Zn-ribbon_8
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ALB29057
UniProt:
A0A0K2LCP0
LinkDB
All DBs
Position
complement(1455733..1460034)
Genome browser
AA seq
1433 aa
AA seq
DB search
MSDTKQLFEILVKQIKLDSLLESQDSFANGKLNKLEVHKNSKRWTFFFEFTDVLPFNEFL
TFVKALKASFDGIAQVNFEITTTKAELREKDVKDYWNYVLNDCGVNSPMVISRISQTPPY
MLDGHVFFDVSNDFMADVIDGSLLNGLQAEYSSLGFPDFKIRTNIDENKSQEKEAAMKAA
AAEKAKEFQAKAKEVSEKKAAKPVGNVSKVGRKIPDDQEITQMVDIIEEDRGKVVEGYVF
DIDVRKLKSGRSLLILKVTDYTSSFSIKKFSNGEDDETFFNSLDKGAWIRVRGSVQEDNF
SRELVIMAQDINIIKHASRQDTAEDDNKRIELHAHTNMSQMDAIPSATDLIKRASDWGQT
GIAITDHRALQAFPEAYNAGKKFGVKIAYGVEVDLVDEGNPIAYNLRDQKLEGSEYVIFD
TETTGLSAVYDSIIEIGATKMKDGEVIDRFDKFINPGHPLSEITTNLTSITTEMVENEPD
ENVIVGEFMDFIGDDILVGHNVTFDMGFMNAALTRMGRNRLAMPVIDTLEMSRTLHSEYR
NHKLDSLAKRYNIVLEHHHRADSDAETTGYLMYKLFAELEDKFGTNNVEQLNDHIGGEEA
YKQARPTHAVLLAKTQAGLKNMFKIVSYSMTQYYYRTARVPRRLLNKYREGIIVGSACEN
GEVFTSMMQKGYDDTRELAQYYDYLEVMPRSLYQHLIDIKIIKDENALEEILKNIVKLGK
ELNKPVVATGDVHYLDEHDKVYRDIVIKAVKSNALGRRPELPDVQFRTTNEMFDEFNYMD
QATEQEIIVDNPKKIMDSIDEISPVKDKLYTPKMEGAEDEIKNLTLNKAHELYGDPLPEI
VQERMDKELKSIIGNGFSVIYLISQRLVYKSNKDGYLVGSRGSVGSSFVATMTGITEVNP
LPPHYRCPKCKYSEFFTKGEVGSGYDLDDKKCPKCGTDLEKDGQDIPFETFLGFKGDKVP
DIDLNFSGDYQPVAHNYTKVLFGEDHVFRAGTIGTIADRTAFGYVKNYQELTGKNLRNAE
VERLAIGSTGVKRTTGQHPAGIIVVPDYMDIFDFTPIQYPADDQSALWKTTHFDFHSIHD
NILKLDILGHDDPTMIRMLQDLSGIDPKSLPVKDPEVMELFRSTESLGVTPEQIFSKTGT
LGVPEFGTRFVRGMLEKTHPTTFAELLQISGLSHGTDVWLGNAEELIDKGIVTLKEVIGC
RDNIMMDLIHYGMDSQMAFQIMEHVRKGRGIPDDWKQAMKDADVPDWYIDSCLKIKYMFP
RAHATAYIIMALRIAYFKVHYPLYYYSAYFTVRADDFDLVSMTTGKDAVKAAMKEINDKG
MDASTKEKNLLTVLELANECLERGFKIKMVDIEKSDAFEFKIIDDKTLLAPFNAIPGLGD
NVAKQIIAAREEKPFLSKQDLSTRGKVSKTVIEYMTENHALDGMPEENQLSLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatacaaaacaactttttgaaatacttgttaagcaaattaaattagatagtctc
ttggagtcgcaagattctttcgctaacggtaagttgaataagctggaagttcataaaaat
agtaaacgttggaccttctttttcgagttcacagacgtcttgccattcaatgaatttctg
acttttgtcaaagcactgaaagctagtttcgatgggattgctcaagttaattttgagata
actaccaccaaagctgaattgagagaaaaagatgttaaagattattggaattatgtttta
aatgactgtggcgtcaattcgccaatggttatcagccgaatcagtcaaacaccgccatat
atgctggatggacatgttttctttgatgtctccaacgattttatggctgatgtgattgat
ggcagtttgttgaacggtttacaggctgaatacagtagtctcggtttccccgactttaag
attcgtaccaatattgatgagaataagtcacaggaaaaagaagctgctatgaaagctgct
gcggctgagaaggctaaagaattccaagctaaagccaaagaagtcagcgagaagaaagct
gctaaaccagttggtaatgtttcaaaagtcggtcggaagattccggatgatcaagaaatt
acacaaatggttgatatcatcgaagaagaccgtggcaaagttgtcgaaggttatgtcttt
gacatcgatgttcgtaagttgaagtctggtcgttcactgttgattttgaaagtaaccgat
tatacttcttcattcagtatcaagaagttctcgaatggtgaagatgatgaaactttcttc
aattcactcgacaaaggtgcttggatcagggttcgtggtagcgttcaagaggataatttt
tcacgtgaattggttatcatggcgcaagatatcaatattatcaagcatgcttcacgccaa
gatacggctgaagatgacaacaagcgaattgaattacacgcccacactaatatgagtcaa
atggatgccattcctagtgccactgatttgatcaaacgtgctagtgactggggtcaaacg
ggtattgctatcactgaccatcgtgctttgcaggcctttccggaagcttataacgctggt
aaaaaattcggcgtcaagattgcttatggtgtcgaggttgacttagttgatgaaggtaat
ccgattgcgtataacttgcgagatcaaaaactcgaaggttctgaatatgtaatttttgat
actgaaacgactggtttatcagctgtctacgattccattattgaaattggtgctacgaaa
atgaaagatggtgaagtgattgatcgattcgataaatttatcaatcctggtcatccgttg
tcagagataacaactaatttgactagtatcacgactgagatggttgagaatgagcctgat
gaaaatgttattgtcggcgaattcatggactttatcggtgatgacatcttggttggacac
aacgttaccttcgatatgggattcatgaatgctgccttaactcgtatgggacgtaaccgt
ttggcaatgccagttatcgatactttggaaatgtcacgtacgttgcattctgaataccgt
aatcataagttggattcattggctaaacgttacaatattgttttggaacatcaccataga
gctgattccgatgctgagacaactggttatttgatgtacaagttgtttgcggagttggaa
gataagtttggtactaacaatgttgaacaattgaatgatcatattggtggggaagaagct
tataaacaagctcgtccaacccatgctgttttgttagctaagacacaagctggtttgaaa
aatatgttcaagattgtatcttactcaatgacacagtattattaccgaacggctcgtgta
ccaagacgtttattgaataaatatcgtgaaggtattattgttggctctgcttgtgagaat
ggtgaagttttcacaagtatgatgcaaaaaggatatgacgatacgcgtgaattagctcaa
tactatgattatttggaagtcatgccacgttcgttatatcaacatttaattgatattaag
attattaaagacgaaaatgctttggaagaaattttgaagaatatcgttaaattgggtaag
gaattgaataagcctgttgtcgcaacgggggatgttcactatttggacgaacacgacaaa
gtttatcgtgatattgtcatcaaggcggttaagagtaatgccttgggtcgtcgtcctgag
ttacctgatgttcaatttagaactactaatgaaatgtttgatgaatttaactatatggat
caagcaactgaacaagagattatcgttgataatcccaagaaaatcatggattctattgat
gaaatttctccggttaaagataaactttacactcctaaaatggagggtgccgaagatgaa
attaagaatttaactttgaacaaagctcatgaactctatggtgatccgttgcctgaaatt
gttcaggaacgaatggataaagagctaaagagtatcattggtaatggtttctcagttatt
tatttgatttcacaacgtttagtttacaaatctaataaagatggatatttggttggttcc
cgtggttccgttggttccagtttcgttgctaccatgaccgggattactgaagttaatcct
ttgccgccacattatcgttgtcctaaatgtaagtattctgaattctttactaaaggtgaa
gttggttcaggatatgatttggatgataagaaatgtcctaagtgtgggactgatttagaa
aaagatggtcaggatattccgttcgaaacattccttggtttcaagggtgataaggttcct
gatattgatttgaacttctctggtgactaccaaccagtagcccataattatacgaaagta
ttgttcggggaagatcacgtgttccgtgctggtactattggtacaattgctgacagaaca
gcttttggttacgttaaaaactatcaagagttgactggtaagaatcttcgtaatgctgaa
gttgaacgtttagctattggttcaactggtgttaaacgaacaactggacaacatccggcc
ggaatcatcgttgtgcctgattacatggacatctttgatttcacgccaattcaatatccg
gctgatgatcagtcagcactttggaaaacgactcactttgatttccactcaatccatgat
aatatcttgaaactcgatattttgggacatgatgatcccacgatgatccgtatgctacaa
gatttgtcaggtattgatcccaagagtttgccagttaaagatcctgaagttatggagctc
tttagaagtactgaatcacttggtgttacacctgaacaaattttctcaaagactggtaca
ttaggagttcccgaatttggtactcgttttgttcgaggaatgctagagaaaactcaccca
acaacttttgccgaattactacaaatttctggactatcacatggtactgatgtgtggtta
ggaaatgcggaagagttgatcgacaagggtattgttactttgaaggaagttattggttgt
cgtgataatattatgatggatttgattcactatggtatggattcacagatggctttccaa
attatggagcacgttcgtaaaggtcgtggtattccagatgattggaaacaagcgatgaag
gatgcggatgttcctgattggtacattgattcgtgtttgaagatcaagtacatgttccct
cgagctcacgcgacagcttacattatcatggcgcttcgaattgcttactttaaggttcac
tatccactttattattacagtgcttactttacagttcgtgctgatgattttgaccttgtt
tcgatgacaactggtaaagatgccgtcaaagcagcgatgaaggaaatcaatgataaaggg
atggacgcttcaacgaaagaaaagaatttgttaactgtgttagaattggctaatgagtgt
ttggaacgtggattcaagatcaagatggtcgatatcgaaaaatctgatgcttttgagttc
aagattatcgatgataagacgcttttggcaccgttcaatgccattcctggtctgggtgat
aacgttgctaaacaaatcattgccgctcgtgaagaaaaacctttcttatctaaacaagat
ttgagtactcgtggtaaggtttcgaaaacagttatcgaatatatgactgaaaatcatgct
ttagatggtatgcctgaagaaaatcagctatcattattctag
DBGET
integrated database retrieval system
