Companilactobacillus heilongjiangensis: JP39_06980
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Entry
JP39_06980 CDS
T04057
Name
(GenBank) primosomal protein DnaI
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lhi
Companilactobacillus heilongjiangensis
Pathway
lhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JP39_06980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhi03400
]
JP39_06980
Enzymes [BR:
lhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JP39_06980
DNA repair and recombination proteins [BR:
lhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JP39_06980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
DEAD
Zn_ribbon_PriA
PriA_C
Helicase_C
PIF1
SLFN-g3_helicase
nSTAND_NTPase5
Zn_ribbon_6
AAA_30
IBR_1
ATPase_2
AAA_19
Phage_sheath_1
Motif
Other DBs
NCBI-ProteinID:
ALB29129
UniProt:
A0A0K2LCV4
LinkDB
All DBs
Position
complement(1534806..1537214)
Genome browser
AA seq
802 aa
AA seq
DB search
MAVAEIIVDVPTMQTNRPFEYMIPDTLSDVVVPGMRVEVPFGRGKRKIQGFVMKVKDQSD
FQGKLKPISRVIDLKPVLSTEMLDLSSWLADRTYSFQISCLQTMLPSVMRAKYKQFVIPV
VADDPEVMNLLQGKPTFEITNQIDDETVKLINRLRKDEKVDIQYVVENQAVQVKRQAVTT
DLNVIQLHEAKSQLRANAKSQIKLLEFLADNLNDLPVEFNVLEKDYGISRAAIKTAEKNK
LVKVVEVTKLRKPVGITPEKTTKLALTDEQQVAVDQITESIENQTPQTFLIEGVTGSGKT
EVYLQTIEKALQQDKTALMLVPEISLTPQMVNRVVGRFGDQVAVLHSGLSNGERYDEWTR
IENHDVKVVVGARSAVFAPLNHIGLIIIDEEHEASYKQDDNPRYHARDVALWRAQVNKCP
VVLGSATPSLESRARAEKGVYKLIRMKKRINNQVLPHVHIVDMRDAENSAVKGDFSPALK
AGLEKTLADHNQAIVLLNRRGYSSFMMCRECGFVLKCPNCDVSLTYHKDLGKMKCHYCGH
EEPVPKICPNCHSTKIGFYGTGTQNIEQQLNDLFPEARVLRMDVDTTRRKGAHAKILKQF
GQHKADILLGTQMIAKGLDFPDVTLVGVINADTTLSLADFRASERTFQLLTQVSGRAGRA
EKTGHVIIQTFNPDHYAIKDAAKQDYETFFKQEMYLRHQSNYTPYYFTTLISVANQDEGK
TLKQSYWLKKQLQTALSKDAILLGPSPTMISRKQNKYYYQIIVKYKHEPQLHQRLLEILN
ETQADAKNGFTIAIDNEPQHID
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagcagagataatcgttgatgttccgacgatgcaaacgaaccgaccttttgaa
tacatgattcctgatactttgtccgatgtggtcgtaccggggatgcgtgttgaagtgcct
tttggtcgtggtaaacgtaaaattcaaggttttgtgatgaaggttaaggatcagtctgac
tttcaaggtaaattaaaaccgatttctcgtgtgattgatttgaagcctgttttatcgacc
gaaatgttggatttatcatcatggttggctgatcgaacttattcgtttcaaatttcttgt
ctacaaacgatgttgccaagtgtcatgcgcgctaaatataaacaattcgtgattccggtc
gttgccgatgaccccgaagtaatgaacttgcttcaaggaaaaccaacgtttgaaattaca
aatcagatcgatgatgaaaccgtcaagttgatcaatcgcttgcgcaaagatgaaaaggtt
gatattcaatatgtcgttgaaaaccaagctgttcaagttaaacgacaggctgtgacgact
gacttaaatgtgattcagctgcatgaggccaagagtcaattacgtgctaatgcgaagtca
cagattaaattgttggagtttttagctgataatctgaatgatttaccagttgaattcaat
gttttagaaaaagattatggaatttctcgtgctgcaattaagacggctgagaaaaataaa
ctcgttaaggtagtcgaagttactaaattacgtaaaccagtaggaattactcccgagaag
acaactaagttagctttgacagatgaacaacaagtggcggtcgaccagataactgaatcg
attgaaaaccagacgccacagactttcttgattgaaggtgttactggtagtggtaagact
gaagtctacctacagacaattgagaaagctttacaacaggacaagactgccttgatgttg
gtgcctgaaatatctttgacgccacagatggttaaccgagttgttggtcgttttggtgat
caagtggctgttttacacagtggtttgtcgaatggcgaacgttatgacgaatggactcga
attgagaatcatgatgtcaaagtggttgtcggagccagaagtgctgtgtttgcgcctcta
aatcacattggcttgattattattgatgaggaacatgaggccagttacaagcaagatgat
aatccgagataccatgcgcgtgatgtcgctttgtggcgggcccaggttaataaatgtccg
gtggtactcggtagtgctacgccttcattagaatcacgtgcacgagctgagaagggcgtt
tacaagctaatcagaatgaagaaacgtatcaacaatcaagttttgccacatgttcatatt
gttgatatgcgtgatgccgaaaattcagctgttaaaggtgacttttcgccggcattgaaa
gctggtttggaaaaaactttagcagatcataatcaggcgatagttttattgaatcgtcgt
ggctattcttcatttatgatgtgtcgtgagtgtggattcgtactcaaatgtccaaactgt
gatgtttcgctgacttatcataaagaccttggtaaaatgaagtgtcactattgtggacat
gaagaaccagttcccaagatttgtccgaactgtcacagtactaagattggtttttacggt
actggaacgcaaaatatcgaacagcaattaaatgatttattcccagaagcacgtgtttta
cgaatggatgtcgatacaacgagaagaaaaggtgcccatgcaaaaattttgaaacagttt
ggtcagcataaggctgatattttgttgggtacgcagatgattgctaaaggattggatttt
ccagatgttacactagtcggggttattaatgcggatacaacgttaagtttggctgatttt
cgagctagtgaacggactttccaactattgacacaagtcagtggtcgagccggtcgggct
gaaaaaactggtcacgtaattattcagacatttaatccagatcattatgcgattaaagat
gccgctaagcaggattatgaaactttcttcaaacaagaaatgtatctcagacatcaatca
aattacacgccatactactttacaacgctgatcagtgtcgcaaaccaagatgaaggtaag
acgctcaagcaaagttattggctgaaaaaacagctacaaacggctttatcgaaggatgct
atcctattagggccaagtccaacgatgatttcgcgtaaacaaaacaaatattattatcaa
attattgtaaaatataagcatgagccacaattgcaccaaagattattagaaattttaaat
gagacgcaagctgatgctaaaaatggctttacgattgcgattgataatgaaccacaacat
attgattaa
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