KEGG   Companilactobacillus heilongjiangensis: JP39_08120
Entry
JP39_08120        CDS       T04057                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lhi  Companilactobacillus heilongjiangensis
Pathway
lhi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lhi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JP39_08120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lhi03019]
    JP39_08120
Messenger RNA biogenesis [BR:lhi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JP39_08120
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD ATP-synt_B KH_2 KH_KhpA-B V-ATPase_G KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: ALB29322
UniProt: A0A0K2LDE4
LinkDB
Position
complement(1782306..1783871)
AA seq 521 aa
MYPAIITFSFAIVTLIVGVLFGYALCKDAYEKKLSQAKQTAGDIVSDAKKAAKSLKKETL
LEAKDEIHQYREKQEDELKERRRDVQKQENRVLERQDILDKKDQSLEKREENIENNENNI
SARQHKLDEKAKQLTDTLNEQQAELTRVSNLTREQARKIILDKLNKELVHERAKMIQESD
EQAKQRAEKDAKALIVAAIQRSAADTVSESTVTTVTLPNEDMKGRIIGREGRNIRTIEAL
TGVDLIIDDTPEAVALSAYDPVRREIARMALEKLIEDGRIHPARIEEMVDKSRKEMDDHI
REVGEQTVYSLGISSMNPDLIKIIGRMEYRTSYGQNVLNHSIEVAKLSAVMAAEMGEDVM
LAKRAGLLHDIGKAIDREVDGSHVEIGVDIATKYKEPEVVVNTIASHHGDVEPTSLIATI
VAAADAISASRPGARSESMENYIHRLEKLEEIANKHEGVDHSYAIQAGHEIRVMVKPEEI
SDDQAAILARDMKGEIEDNLEYPGHIKVTVVREIRKVELAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgtatcctgctatcataaccttctctttcgctatagtaacattaatcgtaggggtcctt
ttcggatatgctctctgtaaagacgcttacgagaaaaaactttcacaagcaaaacaaact
gctggggatatcgtatcagacgcaaaaaaggctgcaaagtctcttaaaaaggaaactttg
ctagaagccaaagatgagattcatcaatatcgtgaaaaacaagaagatgagttgaaagaa
cgccgccgcgatgttcaaaaacaagagaatagagttcttgaacgacaagacattttggat
aaaaaggaccaatcgcttgaaaagcgtgaggaaaatatcgaaaataacgagaacaatatt
tcagcacgacaacataaacttgatgaaaaagctaaacaattgactgatactcttaatgaa
cagcaagcggagctgacaagagtaagtaacttaactcgtgaacaagcaagaaagattatt
cttgataagttgaacaaagaattagtccatgaacgtgccaagatgatccaagaaagcgac
gaacaagccaaacaacgtgctgaaaaagacgctaaggctttaattgttgccgctattcaa
agaagtgcagctgatacagtttctgaatcaactgtaacgaccgttacattgcctaatgaa
gacatgaaaggtagaatcattggccgtgagggtagaaatatccgcacgattgaagcgctt
acaggtgttgatttgattattgatgatactcctgaagcagtcgctttgagtgcctatgat
cctgtcagacgagaaatcgctcgaatggctttggagaaattgattgaagatggtcggatc
catcctgcacgcattgaggaaatggtcgacaagtccagaaaagaaatggacgatcatatt
cgtgaggttggtgaacaaaccgtttatagtttgggaatcagctcaatgaatccagattta
atcaagattatcggacgaatggaatatcgtacgagttacggtcaaaatgttttgaatcac
tctattgaagtagctaaattatccgctgtaatggctgctgaaatgggtgaagatgttatg
ttagcaaaacgagcaggtttattgcacgatatcggtaaagctatcgatcgtgaagttgac
ggttcccacgttgaaattggcgtggatatcgcaaccaagtataaagaaccagaagtagtc
gttaatacgattgcttcacatcatggggatgtggaaccaacatcattaattgcaacaatc
gttgctgcggctgatgctatttcggcatcacgtcccggcgctagatcagagtcgatggag
aattatatccaccgtcttgaaaaactagaagagattgccaacaagcacgagggtgttgat
catagttatgctattcaagctggtcatgagattcgtgtcatggttaagccagaagaaatt
tccgatgatcaagctgcaattttagctcgtgatatgaaaggtgaaattgaagataacctt
gagtatccaggtcatattaaagttacagttgttcgtgaaatcagaaaagtcgaattagcg
aaataa

DBGET integrated database retrieval system