Companilactobacillus heilongjiangensis: JP39_08965
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Entry
JP39_08965 CDS
T04057
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lhi
Companilactobacillus heilongjiangensis
Pathway
lhi03420
Nucleotide excision repair
lhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JP39_08965
03430 Mismatch repair
JP39_08965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhi03400
]
JP39_08965
Enzymes [BR:
lhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JP39_08965
DNA repair and recombination proteins [BR:
lhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JP39_08965
MMR (mismatch excision repair)
Other MMR factors
JP39_08965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
MSSS
Motif
Other DBs
NCBI-ProteinID:
ALB30194
UniProt:
A0A0K2LFW2
LinkDB
All DBs
Position
complement(1991770..1993998)
Genome browser
AA seq
742 aa
AA seq
DB search
MLKGLNPEQQDAVKATEGPLLIMAGAGSGKTRVLTHRVAYLIEEKNIMPWHVLAITFTNK
AAKEMKERIGKLLNESANDVWVSTFHSLCVRILRRDFDKMGKPKTFTIADPGEQRTLMKQ
ILTKMNLDPKRYDPRAILGTISNAKNELQTPAEYAKVAASPYEQTVASVYDVYAKEMERN
NSLDFDDLIMQTSELFDQCPDVLEKYQEKFQYIHVDEYQDTNEAQYKLVKQLGAKYRNVC
VVGDADQSIYGWRGANIQNIMNFEKDYPEATTIKLEQNYRSTKTILKAANEVINNNGNRK
PKDLWTDNQEGDKIKFYRGQNESDEALYVVDQVKNLLQEGFKYGDFAVLYRTNAQSRTFE
EKLMQANMPYKIIGGHKFYDRKEIRDILAYLRLIANHDDSMSFQRVINSPKRGIGPGTIE
KLQAYADEHSWSLLEAAENIELSPLAARPRKTIGGFAKVIDNLTKLAEDQSMTILMDHLL
EDSGYVEDLKQQNNLESQARVENIEELLTVTTQFDQGYEPDPDVDETRLTTFLTELSLVS
DQDQIEEEQQEITLMTLHAAKGLEFPVVFLVGMEEGIFPLGRSLLKEDDLEEERRLAYVG
ITRAEKRLYLTNAVSRMLYGRLQNNATSRFVEEIKDDAIERVNSNAGNIGRPSGRNSSYK
DRRRVAATTATFQSPTLKAKGASGAEKLHWNVGDKVEHKKWGQGTVVKVNGDGNNAELDV
AFKSEGIKRLLAEYAPIKKVTD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaggtcttaaccccgagcaacaagacgcggttaaggcaacagaaggaccactt
ttaatcatggccggcgccggttcaggtaaaacaagagttttaactcaccgtgtggcttat
ttgattgaagaaaaaaatatcatgccttggcatgtcttagcgattacctttactaacaag
gctgctaaggaaatgaaggaaagaatcggtaagttactaaatgagtcagctaatgatgtc
tgggtctcaactttccactctctttgtgtaagaattttaagaagagatttcgataagatg
ggcaaacctaagacgttcacgattgcagatcctggtgagcaacgtaccttgatgaagcaa
atcttgacaaagatgaacttggatcctaagcgttacgatccgcgtgctattttgggtacg
atcagtaatgctaagaacgaattgcagactcctgctgaatatgccaaggtagctgcttca
ccttatgaacaaacagttgccagcgtttatgacgtttatgctaaagagatggaacgtaac
aactcgcttgatttcgatgacttaatcatgcaaacaagtgaattgttcgaccagtgtcct
gatgttttggaaaagtatcaagaaaaattccaatatattcacgttgatgaatatcaggat
accaacgaagctcaatataaacttgttaaacaattaggtgccaagtaccgcaacgtctgt
gttgttggtgatgctgatcaaagtatttacggttggcgtggtgctaatatccaaaatatt
atgaactttgaaaaggattatcccgaagcaacaacgattaagttggaacaaaattatcgt
tcaacgaagacaattttgaaggctgccaatgaagttatcaacaacaacggtaaccgtaag
cctaaggatttgtggactgataatcaggaaggcgacaagatcaagttttatcgtggtcaa
aatgaatcagatgaagcattgtatgtcgttgatcaagtgaagaatttattgcaagaaggc
tttaaatacggtgattttgcagtgctttatcgaacaaatgctcaatcacgtacatttgaa
gagaaactcatgcaagccaatatgccttataagattattggtggtcataagttctacgat
cgtaaggaaattagggatatcttagcttacttgcgtttgattgctaaccacgatgactca
atgagttttcaacgtgttatcaacagtcctaagcgtggtattggacctggtacaattgaa
aaattgcaagcttatgcggatgaacacagttggtcattgctagaagctgctgaaaatatt
gagctttcaccattggctgcccgtccccgtaagactatcggtggctttgccaaagtcatt
gataatttaactaagttggctgaagatcagtcaatgacaatcttgatggaccacttacta
gaggattctggttatgttgaagatttgaaacaacaaaataacttggagtcacaagcacgt
gtggaaaatatcgaagaacttttgactgttacgactcaatttgaccaaggttatgaaccc
gacccagatgttgatgagacacgtttgacaacgttcttaactgaattgtcattggtcagt
gatcaagatcaaattgaagaagagcaacaagaaattactttgatgacattgcacgctgct
aaaggtttggaattcccagttgtcttcctagttggtatggaagaaggaattttcccactt
ggtcgttcattgctcaaagaagatgacctcgaagaagagcgtcgtctggcatatgttggt
atcactcgtgctgaaaagcgtctctacttaacaaatgccgtcagtcgtatgctttatggc
cgtctacaaaacaacgctacttcacgtttcgttgaagaaattaaagatgatgctattgaa
cgtgtcaacagcaatgctggtaatattggtcgtccaagtggtcgcaattcgtcatataag
gaccgtcgacgtgtagctgctactactgcaaccttccaatcaccaactttgaaagccaaa
ggtgcttctggtgcggagaaattgcactggaacgttggcgataaagttgaacacaagaag
tggggtcaaggtacagttgtcaaagttaatggcgatggtaataacgctgagttagacgtg
gctttcaagagtgaaggtattaaacgtctcttggcagaatatgccccaattaaaaaagtt
actgattaa
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