Companilactobacillus heilongjiangensis: JP39_11130
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Entry
JP39_11130 CDS
T04057
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lhi
Companilactobacillus heilongjiangensis
Pathway
lhi03420
Nucleotide excision repair
lhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JP39_11130
03430 Mismatch repair
JP39_11130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhi03400
]
JP39_11130
Enzymes [BR:
lhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JP39_11130
DNA repair and recombination proteins [BR:
lhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JP39_11130
MMR (mismatch excision repair)
Other MMR factors
JP39_11130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
UvrD_C
PhoH
SLFN-g3_helicase
DUF4351
DEAD
IFT52_GIFT
NACHT
Catalase_C
FBA_2
AAA_30
DUF6694
DUF1706
Motif
Other DBs
NCBI-ProteinID:
ALB29861
UniProt:
A0A0K2LEY1
LinkDB
All DBs
Position
complement(2497610..2499931)
Genome browser
AA seq
773 aa
AA seq
DB search
MTSKPKVNEVDEKQKEQAHLNDVVAQIKKSESRLQEHMEVAEEDLKVINNAFDDIHIGMD
GDSISMDAALSIHQQQQMLDERNNSWQQSRQRLGILKKLEKTPFFARLDFQEKGEPKKET
VYIGLSSFTDKADHFLVYDWRAPISSIYYDGKLGDVTYQTPDGEQDVDLFLKRQFLVEDG
KIKAYFDTQETIGDQMLLEVLDGKSSTHMKGIVKTIQSEQNKIIRDTKSKLLFVQGAAGS
GKTSAILQRIAFLLYRYRGTLTSSQVVMFSPNSLFNDYIKNVLPEMGEQNMVQMTYKQFL
ARRLPNLNVESLSEQFETVVDTDSKNIGKFVSDIEFFKILTNYSKLLGQSGIAFKDIKFQ
GKVFIPKEKIQEFYYSYGPQYNLGNRLDATVDRLIKLLHRKIGAEMRSNWVSEQIENLSK
EQLQALYTTADQEFKNGDEEKKFLARKIVTTMMQGVYKNIKHLRFLNVAANYLNFLKAVP
KIVDLSEHGITNEQWNQFVDKFIQGFQNKQISMNNLSPYLYLYDLVTGKHGELDMKFVFI
DEIQDYTPFQLAYMKYKFPRARYTMLGDLNQSIFTKKNSQTLLSEAQSLFNADETNVVQL
VHSYRSTKQITDFTKAILTNGQRIEPFKRDGDLPNLLMSQNVDESVQQVLGQLKENDKRK
FTTAIIAKTLEDAAKLHELLGAQGVKSTLIRSENQRLATGTIVLPSFLAKGLEFDAVIMW
DASKDKFSEDEQQLVYTIASRAMHKLTITSIGELSQLLQRVPEKYYQVAEPKA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaaacctaaagttaatgaagtagacgaaaaacaaaaagagcaagcccattta
aacgatgtggttgctcaaattaagaagtctgaaagtcgtctccaggaacacatggaagtt
gctgaagaagatttaaaagttatcaataatgcttttgatgacattcatattggtatggat
ggcgattctatttcgatggatgcggcattgtccattcaccaacaacaacaaatgctcgat
gaaagaaataatagttggcaacagtcacgtcaacgtttgggaattctcaagaaacttgaa
aagacaccattctttgcacgattggatttccaagaaaagggtgaacctaagaaagaaaca
gtttatatcggtttgagttccttcactgataaagctgaccatttcttagtctatgattgg
cgtgctcccatttcttctatctattacgatggaaaattaggggatgtcacatatcaaaca
cctgatggtgaacaagatgttgatttgttcctaaaacgtcaatttcttgttgaagatgga
aaaatcaaagcatattttgatacgcaagaaacaatcggtgatcagatgcttttggaagtt
ttggacggtaaatcttcgacacacatgaagggtatcgttaagacgattcagagtgaacaa
aataagattatccgtgatactaagtcgaaactcctatttgttcaaggtgctgccggttcc
ggtaagacatcagctattttgcaaagaatcgcctttctactatatagatatcgtggaact
ttgacatctagtcaagttgttatgttctcaccaaactcgttatttaatgactatatcaag
aatgttttgcctgaaatgggtgaacaaaacatggtccaaatgacgtacaagcaattctta
gcccgtcgtttgccaaatctaaatgttgaaagtttgtcagaacaatttgaaacagtggtt
gatactgatagtaaaaatatcggtaagtttgtttcggatattgaatttttcaaaattttg
acaaattatagcaagttattaggtcaaagcgggattgccttcaaggatattaagttccaa
ggtaaggtctttattcctaaagaaaagattcaagaattttattatagttatggacctcaa
tataatttgggtaatcgtctcgatgcgacagttgaccgtttgatcaagctattgcatcgt
aagattggtgctgaaatgcgttcaaattgggtttccgaacagattgagaacttgagtaaa
gaacaattgcaggctttgtatacaacggctgatcaagaattcaaaaatggtgatgaagag
aagaaattcttggctcgtaaaatcgttacgactatgatgcaaggtgtttataagaatatc
aaacacttgcgtttcttgaatgtcgctgccaattacttgaatttcttaaaagctgtgcca
aagattgttgatttaagtgaacatggcattactaatgaacaatggaatcaattcgttgat
aaatttattcagggattccagaataaacagatttcgatgaacaatttaagtccatatctt
tacttgtatgacttggttacaggtaagcacggtgaactcgatatgaagtttgtctttatt
gatgaaattcaagattatacaccgttccaattggcttatatgaagtacaaattccctaga
gctcgctacacaatgctgggtgatttgaatcaatcaattttcacgaagaagaatagtcaa
acattgctttctgaagcacaaagtctcttcaatgcggacgagacaaatgttgttcaacta
gttcattcatatcgttcaactaagcagattactgactttaccaaagccattttaactaat
ggtcaacgtattgagccattcaagcgtgatggtgatttgccaaatctattgatgtcacaa
aacgtcgatgagtctgttcaacaagttttgggacaactcaaagagaacgataagcgtaaa
tttaccacagctatcattgcgaaaactttggaagatgcggctaagttgcacgaattattg
ggagctcaaggtgttaaatcaactttgattcgctcagaaaaccaacgtttggcaactgga
acaattgtcttgccatcattcttggctaaaggtttggaattcgatgcagtcattatgtgg
gatgcttcgaaagataaatttagcgaggatgaacaacagctggtttacacaattgcttct
cgtgccatgcacaagttgacgattacttcgattggagaattgtcacaattgttgcaacga
gtaccagagaaatattatcaagttgctgaacctaaggcataa
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