Lentilactobacillus hilgardii: G8J22_00993
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Entry
G8J22_00993 CDS
T06851
Symbol
rnj1
Name
(GenBank) Ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lhil
Lentilactobacillus hilgardii
Pathway
lhil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G8J22_00993 (rnj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhil03019
]
G8J22_00993 (rnj1)
Messenger RNA biogenesis [BR:
lhil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G8J22_00993 (rnj1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
SIS_2
DUF4453
Motif
Other DBs
NCBI-ProteinID:
QIR09035
LinkDB
All DBs
Position
complement(999735..1001420)
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AA seq
561 aa
AA seq
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MKKLNVKNNEAAIYGVGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDDLLGVDYVIPDYK
YLVDNKDKIKALVITHGHEDHIGGVPYLMKVLNVPIYAGPLAMALIKNKLEEHGLLNSVE
LHEISDKSVIKFRKTKVSFFRTTHSIPDTLGVAVHTPVGVIVETGDYKFDLTPVTNQPPD
LQEMAKLGAEGVLCLMSDSTNAEKPVWTKSEKWVGISISHIFDQVKDRIIFATFASNISR
IKTACDNALARGRKIAVFGRSMDAAIVNGRELGYLDIPDDAFVDANQLQSLPANKTMILC
TGSQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTTSVNDVINKLEEAGANVIH
GKVNNIHTSGHGGQEEQKLMLRLMKPKFFMPIHGEYRMLKIHTELAEQCGVPLDHSFIMQ
NGDVLALSKDTARLAGHFQAGDVYIDGSGIGDIGSIVLRDRQLLSEEGIVVVVATINLHN
QEIQSGPDILSRGFVYMRESGELLDEGRRRVFKTIRKAMHNKKATEASIRNAVIDDLQEF
LYDKTERHPMILPMLIMNGNH
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgaacgtcaaaaataacgaagcagctatctatggcgttggcggacttggt
gaaattggaaaaaacacctatggcgtccaatttcaggatgaaattattctaattgatgcc
ggaatcaaattccctgaagacgatcttctcggagttgattatgttattccggactacaaa
tatttagttgacaataaggataagattaaggcacttgttatcacacatgggcatgaagat
catatcggtggcgttccatacctgatgaaggttttgaacgtcccaatctatgccggaccg
ttagcaatggctcttatcaaaaacaaactagaagaacatggccttctaaattctgtagaa
cttcatgaaattagtgataaatccgtcatcaagtttcgtaagacaaaagtttcattcttc
agaacaactcattcgattcctgacacactaggtgttgcagttcatacgccagtgggtgtc
attgtcgaaaccggtgattataagtttgacctcacaccggtaactaatcagccgcctgat
cttcaggaaatggcaaagttaggtgctgaaggtgtcctttgtctaatgtctgacagtaca
aatgccgaaaaaccggtttggactaaatcagaaaaatgggttggtatttccatttcccat
atttttgatcaggtgaaagatcggatcatttttgccacatttgcatcaaatatttcccga
attaaaactgcctgtgataatgcattggctcggggacgtaagatcgcggtgtttggccgg
agtatggatgctgccattgttaatggccgtgaattaggatatttggatattcctgatgac
gcatttgttgatgcaaatcaacttcaatccttacctgctaataaaacaatgatcttatgt
actggctctcagggtgaacccatggcagctctttcacgaattgctaatggtactcacaga
cagatttcaattcagcctggagataccgttattttttcaagtaacccaattccaggtaat
acaaccagcgtgaatgatgttatcaacaagcttgaagaagctggtgctaatgttattcat
ggtaaagttaataacattcatacttccggacatggtggtcaagaagaacagaagttgatg
cttcgcttaatgaagcccaagttctttatgccgattcatggtgaataccgaatgttaaaa
atccacacagagcttgccgaacaatgtggtgtcccacttgatcatagttttatcatgcaa
aatggtgacgtcttggcattatctaaagacactgccagattagctggtcacttccaagcc
ggtgatgtctacattgacggtagtggcatcggagatattggaagtattgtattgcgagat
cgacagttactttctgaagaaggtattgtagtcgttgtcgcaacaatcaacttgcataat
caagaaatccaatccggtcctgatattctttctcgtggatttgtgtatatgcgtgagtca
ggtgaactacttgacgaaggcagaagacgcgtatttaagacaatcagaaaagccatgcat
aataaaaaagcaactgaggcttctattcgaaatgctgttattgatgacttacaagagttt
ttatacgataaaaccgaacgtcatccaatgattctgccaatgttaatcatgaacggtaat
cactaa
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