Lentilactobacillus hilgardii: G8J22_01210
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Entry
G8J22_01210 CDS
T06851
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lhil
Lentilactobacillus hilgardii
Brite
KEGG Orthology (KO) [BR:
lhil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhil03019
]
G8J22_01210 (cshB)
03009 Ribosome biogenesis [BR:
lhil03009
]
G8J22_01210 (cshB)
Enzymes [BR:
lhil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G8J22_01210 (cshB)
Messenger RNA biogenesis [BR:
lhil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G8J22_01210 (cshB)
Ribosome biogenesis [BR:
lhil03009
]
Prokaryotic type
rRNA helicases
G8J22_01210 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ApbA
MGS
Motif
Other DBs
NCBI-ProteinID:
QIR09231
LinkDB
All DBs
Position
1222918..1224279
Genome browser
AA seq
453 aa
AA seq
DB search
MTQFSEFHLKPFILNALDDLKFTKPTPVQEKLIPVILQHRDVVGQSATGSGKTHAFLLPI
FNDIDPKIDEVQAVITTPSRELAYQILDAAKQLAKFSPDPISIGSYVGGTDKKRQEDKLK
KEQPQLIVGTPGRVWDLIKNGGLDVHTASKLVIDEADMTLDMGFLDVVDHIAASFGKHVQ
MMVFSATIPQKITVFLKKYMDNPVIEEIPVSSIISPTIDNWLISTKGQDKNQLIYHLLTI
GEPYLVLIFANTRKRVEELTEYLRGQGLKVAMVHGGVKPRERKQIMKRIKNLDFQFVVAT
DLAARGIDIEGVSQVINDDIPTEDLEFFIHRVGRTGRNGMSGTSITLYSPDEEKEVEELE
GMGIHFKPKALKNHEIVDTYDRKRRQTHRKKREKLDPTMIGLIKKKKKKIKPGYKRQIKM
SISRKEEMDRRVSKREESRAKRKQRKQSSKRYK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacacaattttcagagtttcatttaaagccgtttattttaaatgcattagacgactta
aaattcactaagcctacacctgtccaagaaaaactgattccggttatcttgcagcataga
gacgttgttggccaatccgcaaccggaagtggaaagacacatgcatttttgttgccaatt
tttaatgatattgaccccaaaattgatgaagttcaggcggttattacaacaccgagtcgt
gaattggcatatcaaattcttgatgctgctaagcaacttgccaagtttagtccggatcca
atttcaatcggcagttacgttggcggaactgataagaaacgacaagaggataaattaaaa
aaagaacaaccccaactaattgttggcactcccgggagggtttgggatctgatcaaaaac
ggtggactagatgttcatactgcctccaaacttgtcattgatgaagctgatatgacgttg
gatatgggctttttggacgttgttgatcatattgccgccagttttggtaaacatgttcaa
atgatggttttttcggcaactattcctcaaaaaataacggttttcctgaaaaagtatatg
gataatccggttattgaagaaattccagtttcctcaattattagtccaacgattgataat
tggttgatttcaactaagggacaggataaaaaccagttgatctatcacttattgacaatt
ggtgagccgtacttggttttgatctttgcaaatactcgaaaacgtgttgaagagttgacg
gaatatttacggggacagggtctaaaagttgcaatggttcatggtggtgtgaagcctcgt
gagcgaaagcaaattatgaaacgaattaaaaatttagactttcaattcgttgtagcaacc
gatttggctgccagagggattgatattgaaggtgtttcacaagtgatcaatgatgatatt
ccaactgaagatctggaattttttattcatcgcgttggtcgaactggacgtaatggtatg
tctgggacttcaattaccttgtattctcccgatgaagaaaaagaagttgaggaacttgaa
ggtatgggcattcattttaaacccaaagcgctgaaaaatcatgaaattgttgacacttat
gatcgaaaacgtcgccaaactcatcgcaagaaacgggaaaaacttgatccaacaatgatt
gggttgattaagaaaaagaagaagaaaataaaacccggttataaacgtcaaattaagatg
tcaatttcccgaaaggaagaaatggatagacgagtatcaaaacgtgaggaatctcgggca
aaacgtaaacaacgtaagcaaagttccaagcgatataagtaa
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