Lentilactobacillus hilgardii: G8J22_01778
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Entry
G8J22_01778 CDS
T06851
Symbol
ruvB_2
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lhil
Lentilactobacillus hilgardii
Pathway
lhil03030
DNA replication
lhil03430
Mismatch repair
lhil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G8J22_01778 (ruvB_2)
03430 Mismatch repair
G8J22_01778 (ruvB_2)
03440 Homologous recombination
G8J22_01778 (ruvB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhil03032
]
G8J22_01778 (ruvB_2)
03400 DNA repair and recombination proteins [BR:
lhil03400
]
G8J22_01778 (ruvB_2)
Enzymes [BR:
lhil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G8J22_01778 (ruvB_2)
DNA replication proteins [BR:
lhil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G8J22_01778 (ruvB_2)
DNA repair and recombination proteins [BR:
lhil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G8J22_01778 (ruvB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
AAA_22
RuvB_N
AAA_assoc_2
AAA_5
TIP49
AAA_19
AAA_24
Rad17
AAA_14
DUF4175
AAA_2
DUF4972
AAA_7
AAA_16
DnaX_C
ZapB
RNA_helicase
Sigma54_activat
AAA_18
LUC7
Il2rg
RCF1-5-like_lid
Viral_helicase1
Ribonuc_L-PSP
TSC22
Motif
Other DBs
NCBI-ProteinID:
QIR09793
LinkDB
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Position
complement(1768262..1770028)
Genome browser
AA seq
588 aa
AA seq
DB search
MSYQALYRVWRPQRFDEIVGQSIITQTLKNAILTKQISHAYLFTGPRGTGKTSAAKIFAK
AVNCHYLEDGEPCNKCETCRAINEGSLSDVIEIDAASNNGVEEIRDIRDKVKYAPTKADY
KVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPATIISRTQKFDFKRIRP
EDILERMAYILKQKNIEYDDKALKLIAKAAEGGMRDALSILDQAMSYGDDKVTYENALQV
TGSVTNELLTTYVEQVIKKDTKNALITVQKVLDNGKDASRFVEDLTSYCQDILLYQQDPQ
IVEQLELGMVDDKFKALSDQISDEEIYQIINELNEIANSLRYTAHPDVYLQVLTVKITHL
KQLEDVSTTTSVDNADENGKIKMLTDKVNELQREIEQLKKSGPADEASQSQQMVKPKPIE
AKSGNARVELAKIYPILGRATRQSLNEFQEVWPDLMNALSVTQRAVMHVSKPVAASPDGV
IVSFEYPIFFQKAQANRELCDALENNLDRIAGKAPKIVFVPDNQWPKIRKDYLASHKDEL
KGKQNTDPKSQETPTEDEKIDPDSNDPKPIVKKAEELFGKDILDIKND
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggcattataccgggtttggcgaccccaacgttttgatgaaattgttggc
cagtcaattattacccaaacactgaaaaatgcaattttaacaaaacaaatcagccatgcc
tatttatttaccggtcctcgaggaactggtaagacgtctgctgcaaagatttttgccaag
gcagttaactgtcattaccttgaggacggcgaaccttgtaataagtgtgaaacttgcagg
gcaattaacgagggcagcctgagtgacgttattgaaattgacgcggcttctaataatggt
gttgaggaaattcgcgacattcgtgacaaggttaaatatgcgccaacgaaggctgattat
aaagtttatattattgatgaagtgcatatgttgtctacgggtgcgtttaacgcacttcta
aaaacattggaagaaccacctgcaaacgttatttttattttggcgacaacggaacctcat
aaaattccggccaccattatttctcgaacgcaaaaatttgattttaagcggattaggcca
gaggatattttggaacgaatggcctacatccttaaacaaaagaacattgagtacgatgat
aaagcattaaaactcattgcaaaagcagccgaaggcgggatgcgggatgctttaagcatt
cttgatcaggctatgtcatacggcgatgataaggtgacctatgaaaacgcccttcaagta
accggaagcgtaacaaatgaattattgacaacttatgtcgagcaagtgattaaaaaggat
acgaaaaatgctttgattaccgttcagaaggtgcttgataacgggaaagatgctagtcga
tttgttgaagatttaaccagttattgccaagacattcttttgtaccagcaggatccacaa
atcgttgagcagctggaactagggatggttgatgataaattcaaagcattgagtgaccag
atcagcgatgaagaaatttatcaaatcattaatgaattaaacgaaattgctaattcattg
agatacacggctcatccagatgtttatttacaggttttgacggttaaaatcacacacctg
aaacagcttgaggacgtttcaacgactacttcagtcgataatgccgacgaaaatggtaaa
attaagatgttaaccgataaagttaatgaacttcaaagggaaatcgaacaacttaagaaa
tccggtccggctgatgaggcgtctcaaagtcagcaaatggttaagccaaaacccattgag
gctaagtctgggaatgcacgcgttgaattagccaagatttatccgatcttgggaagggct
accaggcagagtctcaatgagtttcaagaggtttggccggatttgatgaacgcactgtct
gttacacaacgagcagtgatgcatgtctccaaaccggttgcggccagcccagatggtgtg
attgtatcatttgaatatccgattttctttcaaaaagcgcaggctaatcgagaattatgt
gatgccttggaaaataatttggatcgaattgccggtaaagcacccaaaattgttttcgtg
ccggataatcaatggccgaaaattcggaaagattatttagctagtcacaaggatgagctg
aagggtaagcaaaataccgatccaaagagtcaggagacgcccacggaagatgaaaagatc
gatccggattcaaacgatcccaagccgatcgtaaaaaaagcggaagagttattcggtaaa
gacattctcgatattaaaaatgattaa
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