Lentilactobacillus hilgardii: G8J22_01979
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Entry
G8J22_01979 CDS
T06851
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lhil
Lentilactobacillus hilgardii
Pathway
lhil03420
Nucleotide excision repair
lhil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G8J22_01979 (pcrA)
03430 Mismatch repair
G8J22_01979 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhil03400
]
G8J22_01979 (pcrA)
Enzymes [BR:
lhil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G8J22_01979 (pcrA)
DNA repair and recombination proteins [BR:
lhil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G8J22_01979 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
G8J22_01979 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QIR09980
LinkDB
All DBs
Position
complement(1982839..1985070)
Genome browser
AA seq
743 aa
AA seq
DB search
MVEDSLLKGLNKDQKDAVIHTEGPVLIMAGAGSGKTRVLTHRIAYIIEHNHVMPWNILAI
TFTNKAAREMRERVSKLLDESGDDVWVSTFHALCVRILRRNIDQLGFNRAFTIADTSEQR
TLVKRVLRELNIDPKRFDPRAVLSSISNAKNDLLTPKAFKAQADSDFDQIVADVYERYQA
ELRQNESLDFDDLIMTTIELFDQFPDVLSYYQDKFHYIHVDEYQDTNEAQYRLVNTLAKK
SKNICVVGDADQSIYGWRGANMQNILDFKEDYPDAHVTLLEQNYRSTKTVLDAANAVIAH
NLNRADKNLWTENEQGEKISYYRGQTENDEARYVVAKIQEEMGKPKRNYGSFAILYRTNA
QSRVIEETLLKANIPYTMVGGHKFYDRKEIRDALAYLTLLGNPRDSMSFERVINEPKRGI
GETSLEKLRTFANDHGWSLLEASKNIDLANEISSRAKNSISMFEQIISDVAKKLDTMTIT
ELTEEILDKSGYLSTLKSSKSLQAQTRLENLEEFISVTQKYDQDNPDQVGQDNLVNFLSD
LALVSDQDDLDEETSEVTLMTMHAAKGLEFPVVFIMGMEEGLFPLSRAAQDESELQEERR
LAYVGITRAKEKLYLTNAYSRMLYGRRQNNPESRFVNEIKPELIQYDNVNQQEKPLSTPF
DRRTRRATATTYHQPAQKVIKPKGTGADKSSWSVGDKVSHKAWGTGTVVKVSGIGEDMEL
DIAFEQKGIKRLLAAFAPITKQE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtggtagaagatagtttattaaaaggtctaaataaagatcaaaaagatgcagttattcac
actgaaggacctgtgctgattatggctggtgcaggtagtggaaagacgcgggtattgaca
catcgaattgcttacataattgaacacaatcatgtaatgccatggaacattcttgcaatt
acctttactaataaagctgctcgtgagatgcgcgagcgggtgtctaagctgcttgatgaa
agtggtgatgatgtatgggtatcaactttccatgcgttgtgtgtgcgtattttacgccgt
aatatcgatcaattagggtttaatcgtgcctttaccatcgcggatacaagtgagcagcga
acgttggtaaagcgtgttttgcgtgaattgaatattgatcccaaaaggtttgacccaaga
gccgtattatcttcaatttcaaatgcaaaaaatgatttattaacgccaaaggcatttaag
gcccaggccgatagcgattttgatcagattgtggcagatgtttatgaacgttatcaagct
gagttgcgtcaaaatgaatcacttgattttgatgacttaatcatgacaacaattgagtta
tttgatcaattccctgatgttttatcttactatcaggataaatttcattatattcatgtt
gacgaatatcaggatactaatgaagctcagtaccgattggtcaatacgttagcaaaaaaa
agcaaaaacatctgtgtggtgggtgatgcagatcaaagtatttatggttggcgtggtgcc
aacatgcagaatattctcgactttaaagaagattaccctgatgcccatgttactttactt
gaacaaaactatcgttcaaccaagacggttttggatgcagcaaatgctgttattgcgcat
aatttgaatcgggctgataaaaacttgtggacagaaaacgagcaaggcgaaaagatttct
tattatcggggccagacagaaaatgatgaagcacgttatgttgtggcaaagatccaagaa
gaaatgggtaaacctaagcgtaattacgggagctttgcgattctgtaccggaccaatgcg
caatcacgtgtgattgaagaaacacttttaaaggccaacattccgtatactatggtcggt
ggccataaattttatgatcgaaaagaaattcgagacgcacttgcttatttgacgttactg
ggaaatccaagggattcgatgagttttgaaagagttattaatgagcctaagcgaggtatc
ggcgaaacgagccttgaaaagttacggacttttgcaaacgatcatggttggtcgctgctt
gaggcttcaaaaaatattgatcttgcaaatgaaatttctagtcgcgctaaaaactcgatt
tcaatgtttgaacaaataatcagtgatgtcgctaagaaattggatacaatgactatcact
gaattaacagaagaaattcttgataagagtggttacttaagtactttaaaatcttcaaag
tctttgcaggctcaaacccgcttggaaaatttggaagaattcatttccgttactcaaaaa
tatgatcaggataatcctgaccaagttggccaagacaatttagttaactttttaagtgat
ttggcattggtttcagatcaggatgacttagatgaagagacttccgaggtaacgttaatg
acaatgcatgcagctaaagggctggaatttccggttgtcttcatcatgggaatggaagaa
ggacttttcccactttcacgtgctgcccaggatgaatccgaattacaagaggagcgacga
ttggcatatgttggtattacgcgtgcaaaagaaaaactatatttaacgaatgcttattca
cgaatgttatatggacgccgacaaaacaatcctgaatctcggtttgttaatgaaattaag
ccggaattgattcagtatgataacgttaatcaacaagaaaaaccattatcgacaccgttt
gatcgccgaactagacgcgcaactgcaacaacttatcatcaaccagcccaaaaagtaatt
aagcccaaagggactggagctgacaagtcttcatggtcggtaggagataaagtgtcacat
aaagcctgggggacaggaacagttgtcaaagtttcagggatcggtgaggatatggaattg
gatattgcatttgagcagaagggaattaaacgtcttttagcagcgttcgcacctattacc
aagcaagagtaa
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