Laribacter hongkongensis: LHK_00013
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Entry
LHK_00013 CDS
T00884
Symbol
ung
Name
(GenBank) Ung
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LHK_00013 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhk03400
]
LHK_00013 (ung)
Enzymes [BR:
lhk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LHK_00013 (ung)
DNA repair and recombination proteins [BR:
lhk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LHK_00013 (ung)
Prokaryotic type
LHK_00013 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACO73009
UniProt:
C1D9B0
LinkDB
All DBs
Position
11981..12670
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AA seq
229 aa
AA seq
DB search
MSLSCLAPTLNLVHPDWQPHLSTALLAHLDHRLSARLESGETVYPPNPDILRALYDTGPA
DVKVVILGQDPYHGAGEACGLAFAVRRGIRIPPSLRNIYRELEDSLDISLPAHGDLSAWS
HQGVLLLNTVLTVAADQAASHRSLGWQTLTDQLVQAVSSAPGARVFLLWGKDAHAKRHLV
DDRRHLVLCAPHPSPLSAWRGFLGCGHFRQANDWLAEQGRLPVNWALEE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttcctgcctggccccgaccctgaatctcgtacatccagactggcaaccccac
ttgtccacagccttgctggcacatctggaccaccggctttctgcccggctggaaagcggc
gaaacagtctatccccccaacccggacatcctgcgtgcgctgtacgacaccggaccggct
gacgtgaaagtcgtcatccttgggcaggacccctaccacggagccggagaagcctgcgga
ctggcctttgccgtacggcgcggcatccgcatcccgccgtccctgcgcaatatctaccgg
gaactcgaggattcactggacatttcgctacctgcgcatggtgacctgtctgcctggtca
catcagggcgtattgctcctgaataccgtcctgacagtagcggcagaccaggcagccagt
catcgttcactgggatggcagaccctgaccgaccagttggtccaggccgtatcgtcggct
cccggtgcacgggttttcctgctgtggggcaaggatgcccatgccaagcgacatctggtt
gatgaccggcggcatctggtgttgtgcgctccccatccttctcccttgtctgcctggcgc
ggttttctgggctgtggacatttccggcaagccaatgactggttggctgaacaaggacgg
ttgccggtgaactgggctctggaagagtaa
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