Laribacter hongkongensis: LHK_00065
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Entry
LHK_00065 CDS
T00884
Symbol
uvrD
Name
(GenBank) UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk03420
Nucleotide excision repair
lhk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LHK_00065 (uvrD)
03430 Mismatch repair
LHK_00065 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhk03400
]
LHK_00065 (uvrD)
Enzymes [BR:
lhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LHK_00065 (uvrD)
DNA repair and recombination proteins [BR:
lhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LHK_00065 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LHK_00065 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_22
DUF3553
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
ACO73061
UniProt:
C1D9U8
LinkDB
All DBs
Position
complement(60528..62660)
Genome browser
AA seq
710 aa
AA seq
DB search
MNSDFLAGLNPAQLAAVTTRSHALVLAGAGSGKTRVLTSRIAWLLREGLASPASVLAVTF
TNKAAREMQTRVGAMLPVNPRMMWIGTFHGLAHRLLRLHHRDAGLPATFTILDSQDQLAA
IKRLLKALNLSDDTYPPRQLMQFINRHKEQGLRPDRVQAASAFDGRLIDIWREYERQCRR
EGVVDFAELLLASFELLTGNEALRAHYQSRFNQILVDEFQDTNRLQYQWLRCLAGPAATL
FAVGDDDQSIYAFRGAEIGNMHDFLRDYHITEPVRLEQNYRSTGTILDAANAVIAHNHGR
LGKSLWTDDAAGEAIRVYRGWNDADEAEFVAEEVRLRRREGVELSDMAVLYRSNAQSRAL
EHALFQAGIAYRVVGGLRFFERQEIKHALAYLRLVASPDDDNALLRVINVPARGIGARTV
ESIQAHAREAGTSLWQAACRTGGRAAASVGRFVQLIESLQGDAARLDFAGLVSHIIDASG
LRALYQADKDGADRLENLDELVNAAVGFQPDDPAQTVTEFLTHAALEAGDHEATPGETAL
TLMTVHAAKGLEFDSVFVTGLEEGLFPHEQSFSDPDGLEEERRLMYVAITRARRRLTLSC
AQSRMLHGQSRYPLPSRFLDEIPLPLLAPVNGSPAAPRTAAPVPAAPRPVKTNVILAGGL
RIGQTVAHPKFGIGVIVRAEGQPDEARVEVNFTDHGSKWLDLRYARLTPL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgatttcctcgccggcctcaatccggcgcagctcgccgccgttacgacccgc
agccacgcgctggtgctcgccggagccggcagcggcaagacccgggtgctgaccagccgc
atcgcctggctgctgcgcgaaggtctggcctcgccggccagcgtgctggccgtcaccttc
accaacaaggccgcccgcgagatgcagacccgcgtcggtgccatgctgccggtcaatccg
cgcatgatgtggatcggcaccttccacgggctggcgcaccgccttctgcgcctgcaccac
cgcgacgccggcctgccggccaccttcaccatcctcgacagccaggaccagctggccgcc
atcaagcggctcctgaaggcgctcaacctgtccgacgacacctatccaccgcgccagctg
atgcagttcatcaaccgccacaaggaacagggactgcgcccggaccgcgtgcaggccgcc
agcgccttcgacggccggctgatcgacatctggcgcgaatacgagcgccagtgccgccgc
gaaggcgtggtggattttgccgagctgctgctggcgagcttcgagctgctgaccggcaac
gaagccctgcgcgcccattaccagtcgcgcttcaaccagatcctggtcgacgaattccag
gacaccaaccgcttgcagtaccagtggctgcgctgcctcgccggccccgcggccaccctg
tttgccgtgggtgacgacgaccagtcgatctacgccttccgcggtgcggaaatcggcaac
atgcacgacttcctgcgcgactaccacatcaccgaaccggtccggctggagcagaactac
cgctccaccggcaccatcctcgatgccgccaacgccgtgattgcccacaaccacggccgg
ctgggcaaatcgctgtggaccgacgacgctgccggcgaagccatccgcgtctaccgtggc
tggaacgacgccgacgaagcggaattcgtcgccgaagaagtgcgcctgcgccggcgcgaa
ggcgtcgagctgtcggacatggccgtgctctaccgcagcaatgcccagagccgggcactc
gaacacgccctgttccaggccggcatcgcctaccgggtggtcggcggcctgcgctttttc
gagcgccaggaaatcaagcacgccttggcctacctgcggctggtggccagcccggacgac
gacaatgcgctgctgcgcgtcatcaacgtgccggcgcgcggcatcggtgcccgcaccgtc
gaatcgatccaggcccacgcccgcgaagccggcaccagcctgtggcaggcggcctgccgt
accggcggccgggccgccgccagcgtcggccgcttcgtgcagctgatcgaatcgctgcaa
ggggatgccgcccggctggattttgccggactggtcagccacatcatcgacgccagcgga
ctgcgcgccctgtaccaggccgacaaggacggcgccgaccggctggaaaacctcgatgaa
ctcgtcaacgccgccgtcggtttccagcccgacgatccggcacagaccgtcacggaattc
ctgacccacgcggcgctggaagccggcgaccacgaggccacgcccggcgaaacggcgctg
accctgatgaccgtgcacgcggccaaggggctggaattcgacagcgtgttcgtgaccggg
ctggaagaaggcctgttcccgcacgaacagagtttttccgacccggacgggctggaggaa
gagcgccggctgatgtacgtcgccatcacccgcgcccgccgccggctgacgctgtcgtgc
gcccagtcgcgcatgctgcacggccagtcgcgctatccgctgccgtcgcgcttcctggac
gagattccgctgccgctgctggcgccggtcaacggcagcccggccgcaccacggacggcg
gctccggttccggccgcgccgcgaccggtcaagactaacgtcatactggccggcggactg
cgaatcggccagactgtcgcccatcccaaatttggtatcggcgtcatcgtgcgcgccgaa
ggccagccggatgaagcccgggtcgaggtgaacttcaccgaccacggcagcaaatggctg
gacctgcgctatgcccgcctgacgcccctctga
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