Laribacter hongkongensis: LHK_00117
Help
Entry
LHK_00117 CDS
T00884
Symbol
holA
Name
(GenBank) HolA
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk03030
DNA replication
lhk03430
Mismatch repair
lhk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHK_00117 (holA)
03430 Mismatch repair
LHK_00117 (holA)
03440 Homologous recombination
LHK_00117 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhk03032
]
LHK_00117 (holA)
03400 DNA repair and recombination proteins [BR:
lhk03400
]
LHK_00117 (holA)
Enzymes [BR:
lhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHK_00117 (holA)
DNA replication proteins [BR:
lhk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LHK_00117 (holA)
DNA repair and recombination proteins [BR:
lhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LHK_00117 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ACO73113
UniProt:
C1DA00
LinkDB
All DBs
Position
complement(117006..118013)
Genome browser
AA seq
335 aa
AA seq
DB search
MQKRLDELDRLLAAGLAPLYVIHGDEMLLALEAADAIRAAARAAGHLEREVLTVEGHFDW
SLLTAAAGSSSLFADRKLLEIHLPSGKPGTEGAEALVRLAARLPDDTVTLVLLPRLDKTQ
QASKWFKALDSAGVTLAAQAVERRELPGWISRRLARQQQSLTPEALAFMADRVEGNLLAA
RQEIDKLALLHPPGELELAALQAAVADVARFDVFQLNAAWLAGETARVARMLAGLEAEGE
APVLALWSVAEELRSLIRIRIGLRDGKPMAQLLRENRMWGERQRLAEPALRRLGQARLQA
ALSECAAIDRAIKGAGPGEPWRRLEALLVGLCRTN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaacgtctggacgagctcgaccgcctgctggcagccgggctggcaccgctgtat
gtcattcacggtgacgaaatgctgctggcactggaggccgccgacgccatccgggccgca
gcccgcgccgccggccatctggaacgcgaggtgctgacggtcgagggccatttcgactgg
tcactcctcaccgcggcagcgggcagcagctcgctgtttgccgacaggaagctgctggaa
atccacctgccgtccggcaagcccggcaccgagggcgccgaggcgctggtgcggctggcc
gcccgcctgccggacgacaccgtgacgctggtgctgctgccgcgtctggacaagacccag
caggccagcaagtggttcaaggcgctcgacagcgccggcgtgacgctggccgcccaggcc
gtcgagcggcgtgaactgccgggctggatcagccgccggctggcccgccagcagcagtcg
ctgacgccggaggcgctggccttcatggccgaccgggtcgaaggcaacctgctggcggcc
cgccaggaaatcgacaagctcgccctgctgcatccaccgggcgaactggagctggccgcg
ttgcaggccgccgtggccgacgttgcccgctttgacgttttccagctcaacgccgcatgg
ctcgccggcgaaaccgcccgcgtcgcccgcatgctggccgggctggaggccgagggtgaa
gccccggtgctggccttgtggtcggtggccgaagagctgcgcagcctgatccgcatccgc
atcggcctgcgcgacggcaagccgatggcccagctcctgcgcgaaaaccgcatgtggggc
gagcgccagcggctggccgaaccggccctgcggcgactggggcaggcacgcctgcaggcc
gccctgtccgagtgtgcggccatcgaccgggccatcaagggtgccggtcccggagagcca
tggcgccggctggaggccctgctcgtcggactgtgcaggacaaactga
DBGET
integrated database retrieval system
