Laribacter hongkongensis: LHK_00279
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Entry
LHK_00279 CDS
T00884
Symbol
rpoA
Name
(GenBank) RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LHK_00279 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhk03021
]
LHK_00279 (rpoA)
03400 DNA repair and recombination proteins [BR:
lhk03400
]
LHK_00279 (rpoA)
Enzymes [BR:
lhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LHK_00279 (rpoA)
Transcription machinery [BR:
lhk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LHK_00279 (rpoA)
DNA repair and recombination proteins [BR:
lhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LHK_00279 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ACO73274
UniProt:
C1DAU3
LinkDB
All DBs
Position
267931..268914
Genome browser
AA seq
327 aa
AA seq
DB search
MQNSASEFLKPRLIDVQPVSATQARVAMEPFERGYAYTLGNALRRILLSSMPGFAPTEVS
IAGVLHEYSALDGVREDVVDILLNLKGVVFKLHGRDSVLLTLKKEGEGAVRASDIDLPHD
VEVVNPDHVICHLAAGGKIDMEIKVEKGRGYQPAPARVKQDDNRQIGTILLDASFSPLRR
VSFSVESARVEQRTDLDRLVMDIETNGVIEPEEAVRSAARILIDQLSIFADLQGTTVEVV
EERAPQVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASKGLTLGMKLENWPPAGLEKP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagcgcttcggaatttctcaagccgcgtctgatcgacgtgcagccggtctcc
gccacgcaagcgcgtgtggccatggagccgttcgagcgaggctatgcctatacgctcggt
aatgcgctccgccgcatcctgctgtcgtccatgcccggatttgcgccgaccgaagtgtct
atcgctggcgttttgcatgagtactccgcgctcgacggggttcgggaagatgtcgtcgac
atccttctgaacctcaagggcgtggtgtttaaactgcatggtcgtgactctgtgctcctg
actctcaaaaaagagggtgaaggcgcagtgcgggccagcgatatcgatctgccccacgac
gtggaagtggtgaatcctgaccacgtcatctgccatctggcagccggtggcaagatcgac
atggagatcaaggtcgaaaagggtcgcggctatcagccggcaccggctcgcgtcaaacag
gatgacaaccgccagatcggtaccattctgctcgacgcatcgttcagcccgctgcgccgc
gtgagcttctcggtggagagtgctcgcgttgaacagcgtaccgacctggaccgactggtg
atggatatcgagaccaacggcgtgatcgagcctgaagaggccgttcgctccgctgctcgc
atcctcatcgaccagctgtcgattttcgccgatctccagggcactactgttgaagtcgtc
gaggagcgcgctccgcaggtcgatccgattctgctgcgcccggttgacgacctcgaactt
accgttcgatcggccaactgcctcaaggcagagaacatctactatatcggcgacctgatt
cagcgcaccgaaaccgagcttctcaagaccccgaacctgggtcgcaagtcgctcaacgag
atcaaggaagttctggcttccaagggtctcactctcggcatgaagctggagaactggccg
ccggctggtctcgagaagccctaa
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