Laribacter hongkongensis: LHK_00550
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Entry
LHK_00550 CDS
T00884
Name
(GenBank) Probable DNA-directed DNA polymerase, bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LHK_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhk03400
]
LHK_00550
Enzymes [BR:
lhk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LHK_00550
DNA repair and recombination proteins [BR:
lhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LHK_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACO73543
UniProt:
C1DCC6
LinkDB
All DBs
Position
complement(518075..518854)
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AA seq
259 aa
AA seq
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MSRRNQVLDALQLTGWCLRQPESGLPARASEVMTLPQPEVLPPATGTEPAPAVVLAPPTA
VMEQVTATDDWDNLSRQVSGCRSCRLCETRTRTVLERGNRQAPLMLIGEGPGEQEDLQGR
PFVGPAGKLLDAMLTATGWSPEQDMYVCNVVKCRPPGNRNPQPDEMAACQAYLQTQIRLV
RPRLIVALGRVAAQSLLATELSVARLRGQTHQYAGYPLVVTYHPAYLLRNLPDKARAWQD
LCRDPPRTGHAGTRPVVMT
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcgcaaccaggtacttgatgccctgcaactgaccggctggtgcttgcgccaa
ccggaatccggcctgcccgcaagggcgagcgaagtcatgacgttgccgcaacctgaggtg
ctccctcccgctaccggcaccgaaccagctccggccgtggtacttgcacccccgaccgcc
gtcatggagcaagtgacagcaaccgatgactgggacaacctgtcccggcaagtctccggc
tgccgcagctgccgtctgtgtgaaactcggacccggaccgtgctggaacgcggcaaccgc
caggctcccctgatgctgatcggcgaaggaccgggcgaacaggaagacctgcaaggtcgt
ccctttgtcgggccagcaggcaaactgctggatgccatgctgacagccacaggctggtcg
ccggagcaggatatgtatgtctgcaatgtggtgaaatgtcgtccgccaggcaaccgcaat
ccgcaaccggatgaaatggcagcctgtcaggcctacctgcaaacgcaaatcaggctggtg
cgtccgcgcctgatcgttgcactcgggcgggtggcagcccagtcattgctggcgaccgaa
ctctcggtcgcccggctgagaggccagacgcaccagtatgccggctatccgctggtcgtc
acctatcacccggcctacctgctgcgcaacttgccggacaaggcccgcgcctggcaggac
ctgtgccgggatccgccgcgaactggacacgcaggtacccggccagtcgtcatgacctga
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