Laribacter hongkongensis: LHK_00716
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Entry
LHK_00716 CDS
T00884
Symbol
metB
Name
(GenBank) MetB
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk00260
Glycine, serine and threonine metabolism
lhk00270
Cysteine and methionine metabolism
lhk00450
Selenocompound metabolism
lhk00670
One carbon pool by folate
lhk01100
Metabolic pathways
lhk01110
Biosynthesis of secondary metabolites
lhk01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LHK_00716 (metB)
00270 Cysteine and methionine metabolism
LHK_00716 (metB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LHK_00716 (metB)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LHK_00716 (metB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lhk04147
]
LHK_00716 (metB)
Enzymes [BR:
lhk01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
LHK_00716 (metB)
Exosome [BR:
lhk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LHK_00716 (metB)
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Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ACO73709
UniProt:
C1D4B5
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All DBs
Position
691671..692816
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AA seq
381 aa
AA seq
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MKFATRAIHAGYERDPATHAVMPPVYQTSIFSYDRLGDEQPYSYSRSANPTRAALEANVA
ALEGMQYGLAFGSGMAAIDAVLRATLVAGDEVIALADCYGGAYRLLTRIYAPAGVTVTFL
DLTTRPELLEDAIGERTRLVWLESPTNPLLKLVDLPRVAAICRARGVTTAIDNTFASPYL
QNPRDSGIDIVMHSATKYLAGHSDVILGVVCTDNEQLAARLKLVQNSAGAVPGPQDCFLA
LRGIKTLALRMQRHCDNAMAVAGFLATHPAIDKVIYPGLPTHPQHELASRQMRGFGGVVT
IYLKDDSRAAAAQVAERLQWFALGESLGGVESIVNHSATMSHGSMPAGVKQALGIREGML
RLSVGIEDVDDLLADLAQALA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgccactcgcgccatccatgccggctatgaacgtgacccggccacgcatgcg
gtcatgcctccggtgtaccagacctcgattttcagctacgaccggctgggcgacgagcag
ccgtactcctattcacgttcggccaatccgacccgtgcagcgctggaggccaatgtggcg
gcgctggaaggcatgcagtacggcctggctttcggcagcggcatggccgccattgatgcc
gtgctgcgcgccacgctggtcgccggcgacgaagtgatcgcactggccgactgttacggt
ggtgcctaccggctgctgacccggatctatgccccggccggcgtgacggtgacgttcctg
gacctgaccacccgcccggagctgctggaagacgccattggcgaacgcacccggctggtc
tggctggaatcccccaccaatccgctgctcaagctggtggacctgccgcgcgtggccgcc
atctgccgcgcccgtggcgtgaccaccgccatcgacaacacgtttgcctcgccgtacctg
caaaacccgcgcgattccggcatcgacatcgtcatgcactcggccaccaaatacctggcc
ggccactcggacgtgatcctcggcgtggtctgtaccgacaacgagcagctggccgccagg
ctcaagctggtacagaactcggccggtgccgtgccgggaccgcaggactgcttcctggcc
ctgcgcggcatcaagaccctggccttgcgcatgcagcgccactgcgacaatgccatggcc
gtggccggtttcctggccacgcatccggcgatcgacaaggtgatttatcccggactgccg
acgcaccctcagcatgagctggccagccggcagatgcgcggctttggcggcgtggtcacc
atctatttgaaggatgactcgcgggcagccgccgcacaggtggccgagcggctgcaatgg
tttgcgctgggcgagtcgctcggcggggtggaaagcatcgtcaaccattccgccaccatg
tcgcatggctcgatgccggccggggtgaaacaggcgctcggcattcgtgaaggcatgctg
cggctgtcggtcggtatcgaggacgtggacgacctgctggccgaccttgcgcaggcgctg
gcgtaa
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