Laribacter hongkongensis: LHK_00740
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Entry
LHK_00740 CDS
T00884
Name
(GenBank) Probable ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
lhk
Laribacter hongkongensis
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhk03019
]
LHK_00740
03016 Transfer RNA biogenesis [BR:
lhk03016
]
LHK_00740
Enzymes [BR:
lhk01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
LHK_00740
Messenger RNA biogenesis [BR:
lhk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LHK_00740
Transfer RNA biogenesis [BR:
lhk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LHK_00740
Prokaryotic type
LHK_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
MCM4_WHD
PSI_PsaJ
Motif
Other DBs
NCBI-ProteinID:
ACO73733
UniProt:
C1D4D9
LinkDB
All DBs
Position
complement(714563..715030)
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AA seq
155 aa
AA seq
DB search
MSSVSPVMHAAWLIALAGLLAVPAHAQEAACTQVARELNARLATPVDSRELAETLGTLAA
TGRLPDRFVTKRQAREAGWQPGKSLWQTDGLAGKSIGGDRFGNREHRLPAGRWQEADLDY
RGGKRNAKRLVFAGSGRRFVTVDHYQSFTEVPPCR
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgtttcccctgtcatgcacgctgcctggctgatcgccctggctggcctcctg
gctgtgcctgcccacgcgcaggaggcggcctgtacccaggtggcccgcgagctcaatgcc
cgtctggccacaccggtcgacagccgtgagctggccgaaacgctgggtacactggcggcc
accggccggctgcccgaccgctttgtcaccaaacgccaggcccgcgaagccggctggcaa
ccgggcaaaagcctgtggcagaccgacgggctggcgggcaaatcgattggcggcgaccgc
ttcggcaaccgggaacaccgtttgccggcaggccgctggcaagaagccgacctcgattac
cggggcggcaaacgcaacgccaagcgcctcgtgtttgccggcagcggacgacgttttgtc
acggttgaccattaccagtccttcaccgaggtgccgccatgtcgctga
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