Laribacter hongkongensis: LHK_01249
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Entry
LHK_01249 CDS
T00884
Symbol
truA
Name
(GenBank) TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lhk
Laribacter hongkongensis
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhk03016
]
LHK_01249 (truA)
Enzymes [BR:
lhk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LHK_01249 (truA)
Transfer RNA biogenesis [BR:
lhk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LHK_01249 (truA)
Prokaryotic type
LHK_01249 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ACO74239
UniProt:
C1D6Z9
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All DBs
Position
1210397..1211248
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AA seq
283 aa
AA seq
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MPAFSLTGRAGPCSGDGCAGEPVDGMRIALGLEYDGRGFAGWQRQPDQDTVQGALEGALS
QIAGHPVSVLAAGRTDAGVHASQQVVHFDTGVERPLTAWVRGVNRFLPPGVAVLWVQPVA
DDFHARFSACSRSYSYYLMNHPVRPALGAGRVGWFHAPLDVPAMQAAAGLLLGQHDFSSF
RAAECQAKTPVKTLARFDISEHDGLIRFDLQADAFLHHMVRNLVGALVYVGKGAHAPEWM
AGLLAARDRTQAPPTFMPDGLYLTAVGYPSHFGLPAACRRVFL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcattttcacttacgggacgggctggtccttgcagcggcgatggctgtgctggc
gagcctgtggatggcatgagaatcgccctcgggcttgaatatgacggccgtggttttgcc
ggctggcaacggcaaccggaccaggacaccgtgcagggcgccttggaaggggcgctgtcg
cagattgccgggcatccggtcagcgtgctggccgccggccggaccgatgccggtgtgcat
gcctcgcagcaggtggtgcactttgataccggagtcgaacggccgctgacggcgtgggtg
cgtggcgtcaaccggtttttgccgcctggtgtggccgtcctgtgggtgcagccggtggcg
gatgatttccatgcccggttttcggcctgctcgcgcagctacagctattacctgatgaac
catccggtgcggccggccttgggtgccgggcgggtcggctggtttcatgcaccgctggac
gtgcctgccatgcaggctgcggctggcctgctgctgggacagcatgatttttccagcttc
cgggctgccgaatgccaggcgaaaaccccggtcaagaccctggcccgctttgacatcagc
gagcacgacggcctgatccgttttgatttgcaggccgacgctttcctgcaccatatggta
cgcaacctggtgggtgcgctggtctacgtcggcaagggcgcacatgcgccggagtggatg
gccggactgctggccgcccgtgaccgcacgcaggcaccgccgactttcatgccggatggc
ttgtatctgaccgcggtggggtatcctagccactttggcctgccggcagcctgccgccgg
gtgtttctctag
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