Laribacter hongkongensis: LHK_01283
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Entry
LHK_01283 CDS
T00884
Name
(GenBank) YcaO multi-domain protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
lhk
Laribacter hongkongensis
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhk03009
]
LHK_01283
Ribosome biogenesis [BR:
lhk03009
]
Prokaryotic type
ribosomal protein modification factors
LHK_01283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
ACO74273
UniProt:
C1D733
LinkDB
All DBs
Position
complement(1243230..1245437)
Genome browser
AA seq
735 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRNIPTEHIRLSQNNIVDPENRYQQTFKIQVELPPDISEKDRQGILRSIERCTVKKVVQT
GPEFIIEEVENLDADAQALLTINPDTGKQTYIAGKDLPLEETIANMSGLLAGLGIKIEIA
SWRNLVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYIERVSCNHFYNDQYWGEE
IANAPFVHYPNERWFKPGKKDALPEGLLDDYTLAIYNPDGELRASNLFDTNSGNTARGIC
ALPYVRQSDGETVYFPTNLIDNLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEI
TLPDVPAEVLAQYPGIVAGIEELENQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSMEVAIERSLTELLQGRSFEGLNDLPRPTFESHAVTEPNNFVEHFIDSSGVVSWRF
FSAKADYDFVEWDYAGQGETSNADEAATLFGILEGMGKEVYMAVYDQLGATACRILVPGY
SEIYPVEDLIWDNTNKALAFREDILNLHRLDDNALEALLERLEDSELDDYTDIITLIGVE
FDENTDWGQLTILELKLLIQLALKQFAEAHDLVGAYLQYNDNTVERGLFYQALNVVLEVL
LDDDLELADYEVNFRRMFGNARMDAVMGSVEGSVRFFGLTPTGMNLEGLDRHQRLIDSYK
KLHKARGTGVATRKT
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaaactgcgtcttgaggccaaattcgacgacttt
accgtcatcgccgaccagcccatccgctacaagggcgacggctcggcaccggggccgttc
gattactttctggcctcgtcggcactgtgcgcggcctacttcgtcaagctctactgcgac
acccgcaatatcccgaccgaacacatccggctgtcgcagaacaatatcgtcgacccggaa
aaccgctaccagcagaccttcaagatccaggtcgagctgccgccggacatttccgagaaa
gaccgtcagggcatcctgcgttccatcgagcggtgcactgtgaaaaaggtggtgcagacc
ggccccgaattcatcatcgaggaagtcgaaaacctcgacgccgacgcgcaggcgctgctg
acgatcaaccccgataccggcaagcagacctatatcgccggcaaggacctgccgctggaa
gaaaccatcgccaacatgtccggcctgctcgccgggctgggcatcaagatcgaaatcgcc
tcgtggcgcaacctggtgcccaatgtctggtcgctgcacatccgcgacgcgcattcgccg
atgtgcttcaccaatggcaagggcgcgaccaaggaaagcgcgctggcgtcggcgctcggc
gaatacatcgaacgggtgagctgcaaccacttctacaacgaccagtactggggcgaggaa
atcgccaatgcgcctttcgtgcattacccgaatgaacgctggttcaagccgggcaagaag
gacgcgctgcccgaaggactgctcgacgactacacactggccatctacaacccggacggg
gagctgcgtgcctcgaacctgttcgacaccaactccggcaataccgcacgcggtatctgc
gcgctgccctacgtgcgccagtccgacggcgaaaccgtgtatttcccaaccaacctgatc
gacaacctctacctgagcaacggcatgagcgccggcaacacgctggccgaggcgcaggtg
caatgcctgtcggaaatcttcgagcgcgccgtcaagcgcgaaatccttgaaggcgaaatc
acgctgcccgatgtgccggccgaggtgctggcccaatatccgggcatcgttgccggcatc
gaagaactggaaaaccagggcttcccggttcttgtgaaagatgcctccttgggcggcgag
ttcccggtgatgtgcgtgacgctgatgaacccgcgtacaggtggtgtcttcgcctcgttc
ggcgcccatccgagcatggaagttgccatcgaacgcagcctgaccgaactgctgcaaggc
cgcagtttcgaaggcctcaacgacctgccgcggccgaccttcgagagccatgccgttacc
gagccgaacaacttcgtcgaacacttcattgattccagcggcgtcgtgtcgtggcgtttc
ttcagcgccaaagccgattacgacttcgtcgagtgggattacgccggtcagggcgagacc
tccaacgctgacgaagccgcgaccctgttcggcatcctcgagggcatgggcaaggaagtg
tacatggcggtgtatgaccagctcggtgcgacggcctgccgcatcctggtgccgggctat
tccgagatttatccggtcgaggacctgatctgggacaacaccaacaaggcactggctttc
cgcgaagatatcctcaacctgcaccgccttgacgacaatgcgctggaggcactgctcgaa
cgtctggaagacagcgagctggacgattacaccgacatcatcacgctgatcggcgtcgag
tttgacgagaatacggactgggggcagctcacgattctggagctgaagctgctgattcag
cttgccctgaagcagtttgcagaagcgcacgatctggtgggcgcctacctgcagtacaac
gacaacacggtcgagcgcggattgttctatcaggccttgaatgtggtgctggaagtgctg
ctggatgacgatctggaactggccgattacgaggtcaatttccgccggatgtttggcaat
gcgcgaatggatgcggtgatggggtcagtggaaggcagcgtgcgcttcttcggcctgacg
ccaacgggcatgaatctggagggcctcgacaggcaccagcgcctgatcgacagctacaaa
aaactgcacaaggcgcgaggcacgggggtagccactcggaagacgtga
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