Laribacter hongkongensis: LHK_01691
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Entry
LHK_01691 CDS
T00884
Symbol
rho
Name
(GenBank) Rho
KO
K03628
transcription termination factor Rho
Organism
lhk
Laribacter hongkongensis
Pathway
lhk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHK_01691 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhk03021
]
LHK_01691 (rho)
03019 Messenger RNA biogenesis [BR:
lhk03019
]
LHK_01691 (rho)
Transcription machinery [BR:
lhk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LHK_01691 (rho)
Messenger RNA biogenesis [BR:
lhk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LHK_01691 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
ACO74676
UniProt:
C1D886
LinkDB
All DBs
Position
1617542..1618798
Genome browser
AA seq
418 aa
AA seq
DB search
MHLSDLKHLHVSKLVEMAAENDIEGANRLRKQDLIFALLKGQAKKGESIFGDGTLEVLPD
GFGFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDSIEGEIRTPKEGERYFALVKVDRIN
SELPEKSKNKILFENLTPLHPTERLTLERDIRAEENITGRIIDMIAPIGKGQRGLLVAPP
KSGKTVMLQNIAHAITANHPDVVLIVLLIDERPEEVTEMTRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIASALIDTGSRMDDVIYEEFKGTGNSEIHLDRRMAEKRIFPAINI
NRSGTRREELLIPQEQLQRMWVLRKLLYPMDDLEAMDFLLDKIKSTKSNQQFFDSMRR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttccgatctcaaacacctgcacgtttccaaactggtcgaaatggccgctgaa
aacgacattgaaggtgccaaccgtctgcgcaagcaggatctcattttcgccctgctcaag
gggcaggccaaaaaaggcgaaagcatttttggcgatggcacactggaagtcctgccggac
ggttttggcttcctgcgcagccccgacaccagctatctggccggtcctgacgacatctat
gtcagccccagccagatccggcgcttcaacctccacacaggcgacagcattgaaggcgaa
atccgcaccccgaaagaaggggagcgctatttcgccctggtcaaggttgaccgcatcaat
agcgagttgccggaaaaatccaagaacaagatcctgttcgaaaacctgactccgctgcat
ccgaccgaacggctgacactggagcgggacattcgcgcagaggaaaacatcaccggtcgc
atcatcgacatgatcgcgccgatcggcaaaggacagcgtggcttgctggtcgcaccgccc
aagtccggcaagacggtcatgctgcagaacattgcccatgccatcacggccaaccatccg
gatgtcgtgctgatcgtcctgctgattgacgagcgtccggaagaagtgaccgaaatgacc
cgcaccgtgcggggggaagtagtggcatcgacgtttgacgagcctgccacccgccacgta
caggtcgccgaaatggtgatcgaaaaagccaagcgccttgtcgagcacaaaaaggacgtg
gtgatcctgctggactccatcacccgtctggcccgtgcctacaacaccgtagtgccgtca
tccggcaaggtgctgaccggtggtgttgatgccaatgccctgcaacgccccaagcgtttc
ttcggtgctgcccgcaatatcgaagaaggtggcagcctgaccatcattgcctcggccctc
atcgacaccggcagccgcatggacgatgtgatctacgaagaattcaagggtaccggcaac
tcggaaatccatctggaccgccgcatggccgaaaaacggattttcccggccatcaacatc
aaccgctccggcacgcgtcgtgaagaactgctgatcccgcaagaacagctgcaacgcatg
tgggtgctgcgcaagctgctgtacccgatggacgacctcgaagcgatggatttcctgctc
gacaagatcaagagcaccaagtccaaccagcagttcttcgactcgatgcgtcgctga
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