Laribacter hongkongensis: LHK_01856
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Entry
LHK_01856 CDS
T00884
Symbol
dapF
Name
(GenBank) DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk00300
Lysine biosynthesis
lhk00470
D-Amino acid metabolism
lhk01100
Metabolic pathways
lhk01110
Biosynthesis of secondary metabolites
lhk01120
Microbial metabolism in diverse environments
lhk01230
Biosynthesis of amino acids
Module
lhk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LHK_01856 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LHK_01856 (dapF)
Enzymes [BR:
lhk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LHK_01856 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ACO74840
UniProt:
C1D8Q0
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All DBs
Position
complement(1762867..1763703)
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AA seq
278 aa
AA seq
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MKLKFTKMQGLGNDFAVLDGVRQTIRLTPEQIRKLGDRRFGIGFDQLLLVEPPQDAGNDF
SYRIFNCDGGEVEQCGNGARCFARFVFDHGLTDRREIRVETARGVIVPRLADDGLVTVDM
GPPRFRPADIPFVAAEDAVIHELEVAGQILGVTVVSMGNPHAVQVVDDVDTAPVTAFGPL
IENHLRFPARVNAGFMQIESRTAICLRVFERGSGETLACGTGACAAVVAGIRRGLLDADT
PVTVQTRGGELRIRWAGDGHPVWMTGPAVTVFEGEITL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaagttcaccaaaatgcagggccttggcaatgatttcgccgtgctcgacggc
gtacgccagaccatccgcctgacgccggagcaaatccgcaagctgggagaccggcgcttc
ggcatcggctttgaccagttgctgctggtggagccgccgcaggatgccggcaatgatttc
agctatcgcattttcaactgtgatggcggtgaagtggagcaatgcggcaatggtgcccgc
tgctttgcccggttcgtttttgaccacggcctgactgaccgccgcgaaatccgggtggaa
acggcccggggcgtgattgttccgcgtcttgctgacgacggtctggttaccgttgacatg
gggccaccccgcttccggccggctgacattccctttgtggctgctgaagatgccgtaatc
cacgaactggaagtggccggacaaatacttggcgtgaccgtggtatcgatgggcaatccg
catgcggtgcaggtggtggacgatgtcgatacggcgccggttacggcctttggcccactg
atcgaaaaccacctccgtttcccggcccgggtcaatgccggtttcatgcagattgagtcg
cgtacggcgatctgcttgcgggtgttcgaacgtggcagcggtgaaaccctggcctgcggc
accggagcctgtgccgccgtcgtggcgggtatccgtcgcggcctgctggatgcggatact
cccgttacggtgcagacccggggcggggaactgcggatccgctgggctggcgacgggcat
ccggtctggatgactgggccggccgtgaccgtattcgaaggggaaatcacgctatga
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