Laribacter hongkongensis: LHK_01877
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Entry
LHK_01877 CDS
T00884
Symbol
groEL1-2
Name
(GenBank) GroEL1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHK_01877 (groEL1-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhk03019
]
LHK_01877 (groEL1-2)
03110 Chaperones and folding catalysts [BR:
lhk03110
]
LHK_01877 (groEL1-2)
03029 Mitochondrial biogenesis [BR:
lhk03029
]
LHK_01877 (groEL1-2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lhk04147
]
LHK_01877 (groEL1-2)
Enzymes [BR:
lhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LHK_01877 (groEL1-2)
Messenger RNA biogenesis [BR:
lhk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LHK_01877 (groEL1-2)
Chaperones and folding catalysts [BR:
lhk03110
]
Heat shock proteins
HSP60 / Chaperonin
LHK_01877 (groEL1-2)
Mitochondrial biogenesis [BR:
lhk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LHK_01877 (groEL1-2)
Exosome [BR:
lhk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LHK_01877 (groEL1-2)
Exosomal proteins of other body fluids (saliva and urine)
LHK_01877 (groEL1-2)
Exosomal proteins of breast cancer cells
LHK_01877 (groEL1-2)
Exosomal proteins of colorectal cancer cells
LHK_01877 (groEL1-2)
Exosomal proteins of bladder cancer cells
LHK_01877 (groEL1-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
FANCAA
Motif
Other DBs
NCBI-ProteinID:
ACO74861
UniProt:
C1D8S1
LinkDB
All DBs
Position
complement(1782336..1783979)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGDSARSKMVDGVNILADAVKVTLGPKGRNVVLERSYGAPTITKDGVSVAKEI
TLKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQAIMQEGMKYVAAGMNPIDLKRGI
DKAVVALVAEIKNIAKPCATTKEIAQVGAISANSDTVIGDKIAAAMEKVGKEGVITVEDG
SGLEDELEVVEGMQFDRGYLSPYFINQPEKQIAQLDNPFILLCDKKITNIRELLPVLEQV
SKAGRPLLVIAAEDVEGEALATLVVNNMRGILKTVAVKAPGFGDRRKAMLEDIAILTGGT
VISEEIGLPLEKATIDMLGQAKRIEVSKDTTTIIDGVGTAEAIKARVEQIRAHIETASSD
YDREKMQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVAL
LRARANLKEVATINAEQAAGVQIVMRAIESPLRQIVANAGDEPSVVVNKVYEGSGNFGYN
AATGEYGDLVEMGVLDPAKVTRSALQHAASVAGLMLTTDCMVAELPEDKPAMPAGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtcaagtttggtgattccgcccgttccaagatggttgacggggta
aacattctggctgatgccgtcaaggtcacccttggcccgaaaggccgcaatgtcgtgctg
gagcgcagctacggcgctccgaccatcaccaaggatggtgtgtccgttgccaaggaaatc
accctgaaggacaagttcgagaacatgggcgcccagatggtcaaggaagtggcttccaag
accaacgacgtcgctggtgacggcaccaccaccgctactgtgctggcccaggccatcatg
caggaaggcatgaagtacgtcgccgccggcatgaacccgatcgacctcaagcgcggcatc
gacaaggccgtcgtggcgctggtggctgaaatcaagaacatcgccaagccgtgcgccacc
accaaggaaatcgcccaggtcggcgccatttccgccaacagcgacaccgtgatcggtgac
aagatcgctgcggccatggaaaaggtcggcaaggaaggcgtgatcactgttgaagacggt
tcaggcctggaagacgagctggaagtggtcgaaggcatgcagttcgaccgtggctacctc
agcccgtacttcatcaaccagccggaaaagcagatcgcccagctcgacaatccgttcatc
ctgctgtgtgacaagaaaatcaccaacatccgcgaactgttgccggttctggaacaagtc
tccaaggctggccgcccgttgctggtgattgctgccgaagatgtggaaggcgaagcgctg
gccacgctggtggtcaacaacatgcgcggtatcctcaagaccgtggccgtcaaggctccg
ggcttcggcgatcggcgcaaggccatgctggaagacatcgccatcctgaccggcggcacc
gtaatcagcgaggaaatcggtctgccgctggaaaaggccactattgacatgctgggccag
gccaagcgcatcgaggtcagcaaggacaccaccaccatcattgatggcgtgggcactgcc
gaagccatcaaggcccgtgtcgaacagatccgcgctcacatcgaaacggccagcagcgac
tacgaccgcgaaaagatgcaggaacgtctggccaagctggccggtggtgtggccgtgatc
aaggtcggtgctgcgaccgaagtcgaaatgaaggaaaagaaggcccgcgtcgaagacgcc
ctgcacgcaacccgcgctgccgtggaagaaggcatcgtggccggtggcggtgtggccctg
ctgcgcgcccgtgccaacctgaaggaagtggccaccatcaacgccgagcaggcagccggt
gtgcagatcgtgatgcgcgcgatcgaatcgccgctgcgccagatcgtggccaacgccggt
gacgagccgagcgtggtggtcaacaaggtgtacgaaggcagcggcaacttcggttacaac
gctgcaaccggtgagtacggcgacctggtggaaatgggcgtgctcgacccggccaaggtg
acccgttcggccctgcaacacgctgcttcggtggctggcctgatgctgaccactgattgc
atggtggccgagctgccggaagacaagcctgccatgccggccggcggaatgggcggcatg
ggtggaatgggcggcatgatgtaa
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