Laribacter hongkongensis: LHK_01926
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Entry
LHK_01926 CDS
T00884
Symbol
truB
Name
(GenBank) TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lhk
Laribacter hongkongensis
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhk03016
]
LHK_01926 (truB)
Enzymes [BR:
lhk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LHK_01926 (truB)
Transfer RNA biogenesis [BR:
lhk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LHK_01926 (truB)
Prokaryotic type
LHK_01926 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACO74910
UniProt:
C1D8X0
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All DBs
Position
complement(1830000..1830947)
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AA seq
315 aa
AA seq
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MAQQKPRIERRPLDGVLLLDKPCGMTSNTALQRARWMFRAQKGGHTGVLDPLATGLLPLC
FGEATKFSAFLLDADKGYRATLRFGAVSSTLDREGEITPVAPPAFDREQLDAVIRDFTGV
IDQVPPMYSALKFQGKALYEYARAGVEIERKVRQVTIHRIDLLAFDGETAVMDVACSKGT
YIRTLAADIGERLGCGAYLTDLRRTTTAGFRLEQTVTLEQLEALDESGRDGLLLPADILV
SHLPKVVVDEADFQRMTHGQPAAVDPEKAVQRDEKAATISRLRLYAEDGRFFGLGEIRAD
GRLWPDRMLAKARED
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacagaaaccccgcattgagcgccgtccgctggatggcgtgctgttactggac
aagccgtgcggcatgaccagcaacacggccctgcaacgggcccgctggatgttccgtgcg
cagaagggaggacataccggtgtgctggatccgctggcgaccggtttgctgcccctgtgc
tttggtgaagccaccaagttttcggcctttctgctggatgccgacaaaggttaccgggcc
acgctgcgtttcggggcggtcagctcgacgctggacagggaaggcgagattactccggtg
gcaccgccggcgtttgaccgggagcaactggatgcggtcatccgggatttcacgggtgta
atcgaccaggtgccgccgatgtattccgccctcaagttccagggcaaggcgctctatgag
tatgcccgtgccggggtcgagatcgagcgcaaggtgcggcaggtcacgattcaccggatt
gacctgctggcattcgatggcgaaacggcggttatggacgtggcgtgcagcaagggcacc
tatatccgtacgctggccgccgatatcggcgagcgtctggggtgtggtgcttatctgacc
gacctgcggcgtacgaccacggcgggtttccggctggagcagaccgtgacgctggagcag
ctggaggcgctggacgaatccggtcgcgacgggctgttgctgccggcggacatcctggtc
agccacttgcccaaggtcgtggtggacgaggcagatttccagcgcatgacgcatggccag
ccggctgccgttgatccggaaaaagccgtgcagagggatgagaaagctgcgacaatctcg
cgcttgcgcctgtacgcggaagacgggcgctttttcggccttggcgaaatccgtgcagac
ggcaggctgtggccggatcgcatgctggcaaaagcccgcgaggactga
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