Laribacter hongkongensis: LHK_02345
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Entry
LHK_02345 CDS
T00884
Symbol
hupB1
Name
(GenBank) HupB1
KO
K03530
DNA-binding protein HU-beta
Organism
lhk
Laribacter hongkongensis
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhk03032
]
LHK_02345 (hupB1)
03036 Chromosome and associated proteins [BR:
lhk03036
]
LHK_02345 (hupB1)
03400 DNA repair and recombination proteins [BR:
lhk03400
]
LHK_02345 (hupB1)
DNA replication proteins [BR:
lhk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LHK_02345 (hupB1)
Chromosome and associated proteins [BR:
lhk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LHK_02345 (hupB1)
DNA repair and recombination proteins [BR:
lhk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LHK_02345 (hupB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Lmo2446-like_N
Barstar
HU-CCDC81_euk_2
PNK3P
Motif
Other DBs
NCBI-ProteinID:
ACO75327
UniProt:
C1DAY8
LinkDB
All DBs
Position
complement(2239856..2240125)
Genome browser
AA seq
89 aa
AA seq
DB search
MNKSELIDAIAASADLPKAAAGKALDGMIEALTEALKKGDTVTLVGFGSFYVGERAERKG
RNPKTGEEITIPSAKTPKFRPGKALKDAL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatccgaactgatcgacgccatcgctgcctccgcagacctgccgaaggctgcc
gctggcaaggcgctggacggcatgatcgaggcgcttaccgaagccctcaagaaaggcgat
accgtgaccctggtcggtttcggttccttctatgtcggcgaacgcgccgaacgcaagggg
cgcaacccgaaaaccggcgaagaaatcaccattccttccgccaagaccccgaagttccgt
cctggcaaggccctcaaagacgcgctataa
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