Laribacter hongkongensis: LHK_02418
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Entry
LHK_02418 CDS
T00884
Symbol
sdhB
Name
(GenBank) SdhB
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk00020
Citrate cycle (TCA cycle)
lhk00190
Oxidative phosphorylation
lhk00650
Butanoate metabolism
lhk00720
Other carbon fixation pathways
lhk01100
Metabolic pathways
lhk01110
Biosynthesis of secondary metabolites
lhk01120
Microbial metabolism in diverse environments
lhk01200
Carbon metabolism
Module
lhk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lhk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lhk_M00149
Succinate dehydrogenase, prokaryotes
lhk_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LHK_02418 (sdhB)
00650 Butanoate metabolism
LHK_02418 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
LHK_02418 (sdhB)
00720 Other carbon fixation pathways
LHK_02418 (sdhB)
Enzymes [BR:
lhk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LHK_02418 (sdhB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Sdh5
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
ACO75400
UniProt:
C1DB61
LinkDB
All DBs
Position
complement(2309566..2310525)
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AA seq
319 aa
AA seq
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MEKMRFSLYRYNPEKDDKPYMQDIEVEVDSTDVKLLDALVKLKAVDDSLSFRRSCREGIC
GSDAMNINGRNGLACITDLRSLKQPITLRPLPGLPVIRDLIVDMTQFFKQYHSIKPYLIN
DTPAPDRERYQSPEDREKLDGLYECILCACCSTSCPSFWWNPDKYVGPAGLLAAYRFIID
SRDEATSERLDNLNDPYRLFRCHTIMNCTDVCPKGPESGQGDRQHQGHDGHPGDLMMDSR
YDRAARQRIRWHSRRGLLEMDLVLTRFLDRHFDTLGDEEMDAYVRLLELIDTEFLEIVNG
KRDVDDPALQPLVDMLRAV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatgcgtttctcgctctaccgctacaacccggaaaaagacgacaagccgtac
atgcaggacatcgaagtcgaagtcgattcgaccgacgtgaaactgctggatgcactggtc
aagctcaaggccgtcgacgacagcctgtcgttccgccgctcctgccgtgaaggcatctgc
ggctccgacgcgatgaacatcaacggccgcaacggtctggcatgcatcaccgacctgcgc
agcctcaagcagccgatcaccctgcgtccgttgccgggcctgccggtcatccgcgacctg
atcgtggacatgacccagttcttcaagcagtaccactcgatcaagccgtacctgatcaac
gacacgccagcacctgaccgtgagcgttaccagtcgccggaagaccgtgaaaagcttgac
ggcctgtacgagtgcatcctgtgcgcctgctgctcgacttcctgcccgtcgttctggtgg
aatccggacaagtatgtcggtccggccggcctgctggctgcctaccgcttcatcatcgac
agtcgtgacgaagccaccagcgagcgtctggacaacctcaacgatccgtatcgcctgttc
cgttgccacaccatcatgaactgcaccgacgtctgtccgaaggggcctgaatccggccaa
ggcgatcgacagcatcaagggcatgatggccatccgggcgatctgatgatggacagccgt
tacgatcgggccgcacgtcagcgcatccgctggcattcgcgccggggcctgctggagatg
gacctggtcctgacccggttcctggaccggcatttcgatacgctgggtgacgaggagatg
gatgcctatgtccggcttcttgaactgatcgacaccgagtttctcgaaatcgtcaacggc
aagcgtgatgtcgacgatccggccctgcagccgctcgtcgacatgctgcgcgcagtgtaa
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