Laribacter hongkongensis: LHK_02526
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Entry
LHK_02526 CDS
T00884
Name
(GenBank) Probable DNA-directed DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk03030
DNA replication
lhk03430
Mismatch repair
lhk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHK_02526
03430 Mismatch repair
LHK_02526
03440 Homologous recombination
LHK_02526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhk03032
]
LHK_02526
03400 DNA repair and recombination proteins [BR:
lhk03400
]
LHK_02526
Enzymes [BR:
lhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHK_02526
DNA replication proteins [BR:
lhk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LHK_02526
DNA repair and recombination proteins [BR:
lhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LHK_02526
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
UvrC_M
Cho_C
GIY-YIG_UvrC
DUF7508
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACO75508
UniProt:
C1DBV5
LinkDB
All DBs
Position
complement(2402367..2403848)
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AA seq
493 aa
AA seq
DB search
MFDRPYVIVDLETTGGHITRDRITEIGLVEVSHGVTTRWSQLVNPGQPIPPFIEEMTGIS
DAMVAEAPPFAELAPALLARLNGKLLIAHNARFDYGFLKNEFRRLGLTFTTDPLCTVKLS
RRLYPQHAKHSLDSLIARHGIDVPPGMRHRALGDAEAVYVFLQTAVAELGQDAVRAAAAD
LLAAVELPEGVGAGLVDHLPDVPGVFRLMAADGTVLHVGKAANLRASVLRYFQPRVRNQK
EARLAARVASVVWDETLGEFGAALREVRILGQLPAPLAGGKGRADETALSWRLVADEQGY
LGPVPVPLAEALAGHAGRCFGVFRNPREAQRLLATFADSYKLCCKRLGLEQSRSGRPCSA
HSLGRCRGACLGRESAAQFNTRLESVLARHALPSWPFDDALAVVEQDVVTGRCERHLFAD
WRYLGSFTADGEWLEAGDAVNVDLFKLLQATIRQPPASLQLDPCPLAVVPELGRGPTQGK
VTTSMTGSDRREQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgatcgcccttacgtcattgtcgacctggaaacgaccggaggtcacatcacccgt
gaccggattaccgaaatcggcctggtcgaagtcagccacggggtcacgacccgctggtct
cagctcgttaaccccggtcagccgattccgccgttcattgaagaaatgaccggcatcagc
gatgccatggtggcggaggctccaccttttgccgaactagcaccggcactgctggcgcgc
ctgaacggcaagctgctgatcgcgcacaacgcccgctttgactacggctttctgaaaaac
gaatttcgccggctggggctgaccttcaccaccgatccgctctgcaccgtcaagctgtcg
cgccggctctatccgcagcatgccaagcacagccttgacagtctgattgcccggcacggc
atcgacgtgcctcccggcatgcgccaccgggcgctgggagatgccgaggcggtgtacgtg
ttcctgcaaaccgccgttgccgaactgggacaggatgcggtccgggctgcggcggcagac
ttgctggccgccgtcgagctgcccgaaggcgttggcgccggtctggtcgaccatttgccg
gacgtgccaggcgtattccgcctgatggcggcagacggcaccgtgctgcatgtcggcaag
gccgccaacctgcgtgccagtgtcttgcgttatttccagccacgggtccgcaaccagaaa
gaggcccggctggcggcacgggttgccagtgtcgtctgggacgaaacactgggcgagttc
ggtgctgcgctgcgcgaagtccggattcttgggcagttgccggctccgctggccggaggc
aagggacgggcagacgagaccgcgctctcctggcggctggtggccgacgagcaagggtat
ctgggcccggtgccggtgcccctggctgaggctctggccgggcacgctggccggtgtttc
ggcgtattccgcaatccgcgcgaagcgcagcggctgctggcgacgtttgccgacagttac
aagctgtgctgcaaacggctgggactggaacagtcgcgcagtggccgtccctgttctgcc
cattctttggggcgttgccgcggagcctgtctgggacgggaaagtgcggcacagttcaat
acccggcttgagagcgtgctggcgcgccatgccttgccatcgtggccgtttgacgatgca
ctggccgttgtcgagcaggacgtggtaaccggccggtgcgagcggcacctgtttgccgac
tggcgttatctgggcagctttacggcagatggtgaatggctggaggctggtgatgccgtg
aatgtggacctgttcaagctgcttcaggccaccatccggcagcctccggcttcgctgcaa
ctggatccttgtccgcttgctgtggtgccggagttgggccggggcccgactcaaggtaag
gtaacgacctcaatgactggatccgaccggagagaacaatga
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